Hirundo rustica (Barn swallow): 120764783
Help
Entry
120764783 CDS
T09369
Name
(RefSeq) tenascin-X-like isoform X3
KO
K06252
tenascin
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04510
Focal adhesion
hrt04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120764783
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120764783
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hrt00536
]
120764783
Glycosaminoglycan binding proteins [BR:
hrt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120764783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Motif
Other DBs
NCBI-GeneID:
120764783
NCBI-ProteinID:
XP_039944747
LinkDB
All DBs
Position
37:complement(197779..219759)
Genome browser
AA seq
2293 aa
AA seq
DB search
MLQYRDAQGQPQALPIDGTSRSVTVPGLAPSHRYRFHLYGLRGKKKINHVSTEAVTAGDE
PEEQPLSTEEPQHEKPQTEAPASEAPPTTAVLEELRVSSITPSSVQLQWSVPRGSFDSFM
LQYRDAQGQPQALPIDGTSRSVTVPGLSPSRRYRFHLYGLRGKKKINHVSTEAVTAGDEP
EEQPLSTEEPQHEKPQTEAPASEAPPTMAVLEELRVSSITPNSVQLQWSVPRGSFDSFML
QYRDAQGQPQALPIDGTSRSVTVPGLSPSRRYRFHLYGLRGKKKINHVSTEAVTGDEPEE
QPLSTEEPQHEKPQTEAPASEAPPTMAVLEELRVSSITPNSVQLQWSVPRGSFDSFMLQY
RDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLHGAKRIDRVSTDTVTASEEPLPS
EEPQEEKPKTEAPASVLAVLEELKVSSVTPNSVQLQWSVPKGSFDSFMLQYRDAQGQPQA
LPIDGGSRSVTVPGLSPSHRYRFHLYGLRGKKKINHVSTEAVTAGDEPEEQPLSTEEPQH
KKPQTEAPASEATPTTAVLEELRVSSVTPSSVQLQWSVPRGSFDSFMLQYRDAQGQPQAL
PIDGTSRSVTVPGLSPSHRYRFHLYGLRGKKKINHVSTEAVTASEEPLPSEEPQQEKPKT
EAPASETLPMRGVLEELKVSSVTPNSVQLQWSVPKGSFDSFMLQYRDDQDQPQALPIDGT
SRSVTVPGLSPSHRYRFHLYGLWGKKKINHVSTEAVTAGEEPEEQPLSTEEPQHEKPQTE
APASEAPPTTAVLEELRVSSITPNSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTS
RSVTVPGLSPSHRYRFHLYGLHGGKRTDRVSTDTVTASGEPLHLEEPQQETPKPESPASE
ALPVRAVLEELKVSSVTPNSVVLQWSVPEGSFDSFMLQYRDAQGQPQALPIDGGSRSVTV
PGLSPSHRYRFHLYGLRGKKRTDRVSTDVVTGGEEADLEDLPSASMDTPNEVSRTEAPRA
EDHKPEHPRTEAPSARAVLGELKVSSITPDSVGLQWSVPEGPFDSFMLQYQDAQGQPQAL
PLDGGLRLVTVPGLSPSHRYRFHLYGIHRGERTDHVSIDVITAATDEPEQPPLPSEKPQT
EALPTEDNQSEHLQSEVPLVQAVLGELKVSSVTPDSVQLQWSIPKGSFDSFMLQYRDVHG
QPQALPISGESHSVTVPGLSPSHRYRFHLYGLQGGKRIDRVSTDIVTAAAKQEELPLPSE
EPETEAISSDALPARAVLGELKVSSVTPNSVQLQWTVPESPFDSFVLQYRDAQGQPHALP
IDGRSRSVTVPGLSPSRQYRFHLYGLQGGKRTDHVSTDVVTDAAVPEQLPLPSEEPQPED
HKPEQPQTEASQGQAALGKLRVSSVTPNSVQLQWSVPEGSFDSFMLQYRDAQGQPQALPI
DGTSRSVTVPGLSPSHRYRFHLYGLRGKKRTDRVSTDVVTADPEALPSPSMDTPTESPAA
EDHQTAHPQAEAPPSESPSARAVLGELKVSSITPDSVGLQWSVPEGRFDSFTLQYRDAQG
QPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLRGGKKIDHVSSDVVTADREAAAVPEELL
LPSEEPQAERRQTEAHPSATTPARAVLGELKVSGVTSDSVQLQWSVPKGSFDSFTLQYRD
AQGQPQALPIDGGSRSVTVPGLSPSRRYRFHLYGLQGGKRVHHTSNEAVTAAANLDEPPM
PPEELQPEDTQPKDPPVKSPSTDAPLAQAVLEDLRVSSVTPSSVQLQWSVPRGSFDSFML
QYRDAQGQPQALPIDGTSRSVMVPGLSPSRRYRFHLYGLQGGKRTDRVSTDIVTATAKTE
ELPLPSEEPQPEDPKGKDPSTEATPSEAPPARAVLGELKVSSITPNSAQLQWSVPEGPFD
SFTLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLRGGKRIDHVSTEAITGA
PGTLWVGSVWPRSAWLHWDPLHTPPDGYELEYGPPGGPQQTLWLPPEATSQQLWGLQPAG
RYGVRLWSRGGDPQAAPLETIFDTPPLPHPHPRDCAEEQLNGPGPSRETLIFLRGDPARP
LRVFCDMETDGGGWLVFQRRQDGGTDFWRGWESYAHGFGNVSGEFWLGNEALHELTAATR
TELRIDLRTAHDSAFALYRDFAVGSAEERYRLRVGAFSGTAGDALSYHSGSPFSTRDRDS
RDPRDRRDPSGRPRPPPCAVAYGGAWWYRNCHYANLNGLYGTPRDHQGIHWFPWKGFDVS
IPFTEMKLRPQRG
NT seq
6882 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagtaccgggatgcccagggccagccccaggccctgcccatcgatggcacgtcc
cgctcagtgacagtgccagggctggccccatcccatcggtaccgcttccacctttatggg
ttgcggggcaagaagaagattaaccatgtctccactgaggctgtgacagctggagatgag
ccagaggaacagcccctgtccacagaggaaccacagcacgagaaaccgcaaactgaggcc
cccgcttctgaagcccctccaacaacagcagtgctggaggagctgagggtgtccagcatc
acccccagctctgtgcagctgcagtggagtgtccccaggggctcctttgactccttcatg
ctgcagtaccgggatgcccagggccagccccaggccctgcccatcgatggcacgtcccgc
tcagtgacggtgccaggcctgtccccatcccgtcggtaccgcttccacctttatgggttg
cggggcaagaagaagattaaccatgtctccaccgaggctgtgacagcaggagatgagcca
gaggaacagcccctgtccacagaggaaccacagcacgagaaaccgcaaactgaggccccc
gcttctgaagcccctccaacaatggcagtactggaggagctgagggtgtccagcatcacc
cccaattctgtgcagctgcagtggagtgtccccaggggctcctttgactccttcatgctg
cagtaccgggatgcccagggccagccccaggccctgcccatcgatggcacgtcccgctca
gtgacggtgccagggctgtccccatctcgtcggtaccgcttccacctttatgggttgcgg
ggcaagaagaagattaaccatgtctccaccgaggctgtgacaggagatgagccagaggaa
cagcccctgtccacagaggaaccacagcacgagaaaccgcaaactgaggcccccgcttct
gaagcccctccaacaatggcagtactggaggagctgagggtgtccagcatcacccccaat
tctgtgcagctgcagtggagtgtccccaggggctcctttgactccttcatgctgcagtac
cgggatgcccagggccagccccaggccctgcccatcgatggcacgtcccgctcagtgacg
gtgcctggcctgtccccatcccatcggtaccgcttccacctctatgggctgcatggagcc
aaaaggattgaccgtgtctccaccgacactgtcacagccagtgaagaacccttgccctca
gaggagccccaagaggagaagcccaaaactgaggcccctgcatctgtgctagcggtgctg
gaggagctgaaggtctccagtgtcactcccaactctgtgcagctgcagtggagtgtcccc
aagggctcctttgactccttcatgctgcagtaccgggatgcccagggccagccccaggcc
ctgcccatcgatggcgggtcccgctcagtgacagtgccaggcctgtccccatcccatcgg
taccgcttccacctctatgggttgcggggcaagaagaagattaaccatgtctccaccgag
gctgtgacagcaggagatgagccggaggaacagcccctgtccacagaggaaccacaacac
aagaaaccgcaaactgaggcccctgcatctgaggccactccaacaacggcagtgctagag
gagctgagggtgtccagcgtcacacccagctctgtgcagctgcagtggagtgtccccagg
ggctcctttgactccttcatgctgcagtaccgggatgcccagggccagccccaggccctg
cccatcgatggcacgtcccgctcagtgacagtgccaggcctgtccccatcccatcggtac
cgcttccacctctatgggttgcggggcaagaagaagattaaccatgtctccactgaggct
gtgacagccagtgaagaacccttgccctcagaggagccccaacaggagaagcccaaaact
gaggcccctgcatctgagacactcccaatgcgaggagtgctggaggagctgaaggtctcc
agtgtcactcccaactctgtgcagctacaatggagtgtccccaaaggctcctttgactcc
ttcatgctgcagtaccgggatgaccaggaccagccccaggccctgcccatcgatggcacg
tcccgctcggtgacagtgccaggcctgtccccatcccaccggtaccgcttccacctctat
gggttgtggggcaagaagaagattaaccatgtctccaccgaggctgtgacagcaggagaa
gagccagaggaacagcccctgtccacagaggaaccacagcacgagaaaccgcaaactgag
gcacccgcttctgaagcccctccaacaacggcagtgctggaggagctgagggtgtccagc
atcacccccaactctgtgcagctgcagtggagtgtccccaggggctcctttgactccttc
atgctgcagtaccgggatgcccagggccagccccaggccctgcccatcgatggcacgtcc
cgctcagtgacggtgccaggcctgtctccatcccatcggtaccgcttccacctctatggg
ctgcatggaggcaaaaggactgaccgtgtctccaccgacactgtcacagccagtggagag
cccttgcacttagaggagcctcaacaggagacacctaaacctgagtcccctgcatctgaa
gcactcccagtgcgagcagtgctggaggagctgaaggtctccagtgtcacacccaactct
gtggtgctgcagtggagtgtccccgagggctcctttgactccttcatgctgcagtaccgg
gatgcccagggccagccccaggccctgcccatcgatggcgggtcccgctcggtgacagtg
ccaggcctgtccccatcccaccggtaccgcttccacctctacggcctgcggggcaagaaa
aggactgaccgtgtctccaccgatgttgtcacaggtggggaggaagctgacctagaggat
ctcccctcagcctcaatggacaccccaaatgaggtctctagaactgaggcccccagagct
gaggaccacaaacctgagcacccccgaactgaggccccctcagcacgggctgtgctggga
gagctgaaggtctccagtatcacacctgactctgtgggcctgcagtggagtgtccctgag
ggccccttcgattccttcatgctgcagtaccaggatgcccaaggccagccccaggctctg
cccctcgatggcgggttgcgcttggtgacggtaccagggctgtccccatcccaccggtac
cgcttccacctctatgggattcacaggggggaaaggactgatcacgtttccatcgacgtc
atcacagcagccacagatgagccagagcagccacccttgccctcagagaagccccagact
gaagctctgccaactgaggacaaccaatctgagcacctccaaagtgaagtccccctggtg
caggcggtgctgggagagttgaaggtttccagtgtcacacctgactccgtgcagctgcag
tggagcatccccaagggctcctttgactccttcatgttgcagtaccgggatgtccacggc
cagccccaggccctgcccatcagtggagagtcccattcagtgactgtcccagggctgtcc
ccttcccaccggtaccgtttccacctctatgggctgcagggtgggaagaggatcgaccgt
gtctccaccgacattgtcacagctgcagccaagcaggaggagctgcccctgccatcagag
gagcccgaaactgaggccatctcatctgatgccctgccagcacgggcagtgctgggagag
ctgaaggtctccagtgtcacacccaactctgtgcagctgcaatggactgtccccgagagc
ccctttgactccttcgtgctgcagtaccgggatgcccaaggccagccccacgccctgccc
attgatggcaggtcccgctcggtgacagtgcccgggctgtccccatctcgccaataccgc
ttccacctttatgggttgcaaggtgggaaaaggactgaccacgtgtccaccgatgtcgtc
acagatgcagcagtgccggagcagctgcctctaccctcagaggaaccccagcctgaagac
cacaaacctgagcagccccaaactgaggccagccagggacaggcggcactggggaagttg
agggtctccagtgtcacacccaactctgtgcagctgcagtggagtgtccccgagggctcc
tttgactccttcatgctgcagtaccgggatgcccagggccagccccaggccctgcccatc
gatggcacatcccgctcggtgacagtgccaggcctgtccccatcccaccggtaccgcttc
cacctctacgggctgcggggcaagaagaggactgaccgcgtctccaccgatgttgtcaca
gctgacccagaggctctgccctcaccctcaatggacactccaactgagtctcccgcagct
gaggatcaccaaactgcacatccccaagctgaggcccctccatctgagtccccatcagca
cgggctgtgttgggagagctgaaggtctccagtatcacacctgactctgtggggctgcag
tggagtgtccctgagggccgctttgactccttcacactgcagtaccgggatgcccagggc
cagccccaggccctgcccatcgatggcgggtcccgctcggtgacagtgccaggcctgtcc
ccatcccatcggtaccgcttccacctctacgggctgcggggtgggaagaagatcgaccac
gtctcctctgatgttgtcacagctgacagggaagctgcagctgtgccagaggaactgctc
ctgccctcagaggaaccccaagctgagagacgccaaactgaggcccacccatctgcaacc
accccagcacgggcagtgctgggagagttgaaggtctccggtgtcacttccgactctgtg
cagctgcagtggagtgtccccaagggctcctttgactctttcacactgcagtaccgggat
gcccagggccagccccaggccttgcccatcgatggcgggtcccgctcagtgacagtgcct
gggctgtccccatcccgccggtaccgcttccacctctatgggttacagggcgggaagagg
gtccaccatacctccaatgaagctgttacagctgcagccaacttggatgagccacccatg
cctccagaggagctccaacctgaggacacccaacctaaagatcccccagtcaagtccccc
tcaactgatgccccattagcacaggcagtgttggaggacctgagagtttccagtgtcacg
cccagctctgtgcagctgcagtggagtgtccccaggggctcctttgactccttcatgctg
cagtaccgggatgcccaaggccagcctcaggccctgcccattgatggcacatcccgatca
gtgatggtgccagggctgtccccatctcgtcggtaccgcttccacctctatggactgcag
ggaggcaaaaggactgatcgtgtctccaccgacatcgtcacagccacagccaagacagag
gagctgcccctgccctctgaggagccccaacctgaggaccccaaaggaaaagatccctca
actgaggccaccccatctgaggcccccccagcacgggcagtgttgggggagctgaaggtc
tccagcatcactcccaactccgcacagctgcagtggagtgtccctgagggcccctttgac
tccttcacgctgcagtaccgggatgcccagggccagccccaggccctgcccatcgatggc
acgtcccgctcggtgacagtgccagggctgtccccatcccatcggtaccgcttccacctc
tatgggctgcggggtgggaaaaggattgaccacgtctccactgaggccatcactggcgcc
ccagggaccctctgggtgggctctgtgtggccccgcagtgcctggctacactgggacccc
ctgcacacccctcctgatggctatgagttggagtatggcccccctgggggaccccagcag
accctgtggctgcctcccgaggctacgtcgcagcaactgtgggggctacagccagcagga
cgctatggggtgcggctgtggagccgagggggagacccccaagctgcccccctcgagacc
atctttgacactcccccactcccgcacccgcacccccgggactgcgccgaggagcagctg
aatgggccaggcccctcgcgggagaccctcatcttcctccggggggacccggcccggccc
ctcagggtcttctgcgacatggagacggatggcggcggctggctggtgttccagcgccgc
caggacgggggcaccgatttttggcgggggtgggaatcgtacgcccacggcttcggcaac
gtcagcggcgaattctggctcggcaacgaggcgctgcacgagctgacggccgccacccgg
acggagctgcgcattgacctgcggactgcccacgactccgccttcgcgctctatcgcgac
ttcgccgtcggcagcgccgaggagcgatatcggctccgcgtgggagcgttcagcggcacc
gccggcgatgccctctcctaccactcgggcagccccttctccacacgggaccgagactcc
cgggaccctcgggaccgccgggacccctcggggcggccccggccccctccctgcgccgtg
gcctacgggggagcctggtggtaccgcaactgccactacgccaacctgaatgggctatac
gggaccccccgagaccaccagggcatccactggttcccctggaaaggcttcgacgtctcc
atcccgttcaccgagatgaagctgcggccgcagcgtggctga
DBGET
integrated database retrieval system