Hirundo rustica (Barn swallow): 120764784
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Entry
120764784 CDS
T09369
Name
(RefSeq) antigen peptide transporter 2-like isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt02010
ABC transporters
hrt04145
Phagosome
hrt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120764784
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120764784
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120764784
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrt02000
]
120764784
Enzymes [BR:
hrt01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
120764784
Transporters [BR:
hrt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
120764784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_29
AAA_16
AAA_21
AAA_15
AAA_22
SMC_N
AAA_23
DUF87
Motif
Other DBs
NCBI-GeneID:
120764784
NCBI-ProteinID:
XP_039944750
LinkDB
All DBs
Position
37:194246..249736
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AA seq
781 aa
AA seq
DB search
MIQHFGESPGLQVLVGCERGTELGALVWTGCRSSPGSHTRSATLVCTGPAMALPSAGLLP
GLLLVADALTLVLLVPLVPVLASLGVAGVWLEAALRLPVLAVATWLLPRRGPSGATSAAV
TVAITPAAFGTLRYLLGPPGAGTGLLVAATPAWLGVTHAAAALALLAWAVPPAPGGITET
PGDVTETPGAVPKAPGTLRRALALTWEERKVLGAAFLCLVLAAVGETLAPYATGKVLDAI
GSGDGLTAGAIGMVAAAGTTSVLFSGCRGAFFLLLKARLHRILSLRLFSHVVHQDLDFFQ
GVSAAELLAQFSVEVPRVCETAPKGANQLFRSLGMALVVGAFMVGLAPGLALLALLELPL
GIANHRIQSARKQSLQQSMLEASARTASGVQESVAAMETIRIFSAEEEEEEQHSWNLAKE
LRLRERIDLELAFFTLVHRVIELTIRVLVLFRSHQLLRDGYITPGVLVTFLLYQDTVGSH
VQVLLSGFNESVTNAAAGRKIWEYLDRKPTGNVRGTREPPELQGHVTFQKVSFAYPGNPE
QPVLKDVTFEVRSGEVTALVGHNGSGKSTTVALLERLRDPGSGKILLDGIPLPEYEHQYL
HRKVVLVEQDPVLFSGTIRENVMLGLENCKESELREAAIAAGAMDFIQGLEQGWDTEVGE
RGGRLAAGERRRVALARALLRRPAVLILDESLDDGDEGAAQRWLRTGLARTVLVVSHRPR
VLDVADRLVVLDHGAVVETGTPAELRERCGVYSRLLLGGGRTGGPEAPNMGSEKGAALGR
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgatccagcattttggagagtccccagggctgcaggtcctggtggggtgtgagagaggg
actgaattgggagcactggtgtggactggctgtcgatcatcccccgggagccacaccagg
agcgctacactggtctgtactggtcccgccatggctctgccgtctgctggtctccttccc
gggcttctgctggtggccgatgccctgacactggtgttactggtgccgctggtgccggtg
ctggcttcgctgggcgtagcgggcgtgtggctcgaggccgccctgcggctgcctgtcctg
gccgtggccacctggctgctgccccggcgaggtccctccggggccacctccgccgccgtc
acggtcgcaatcacccccgcggctttcggaacgctccggtacctcctggggccacccgga
gctgggacggggctgttggtggccgccactcccgcatggctcggggtcactcacgcagct
gccgcactggccctgctggcctgggccgtgcccccggcccccggcggtatcactgagacc
cctggcgatgtcactgagacccctggcgccgttcccaaagctcctggcaccctccggcgc
gctctggccctgacctgggaggagcggaaagtccttggagctgccttcctctgcctcgtg
ctggcagccgtgggggagacgttggcaccatacgccactgggaaggtgctggatgctatc
gggagtggggatggactcaccgcaggagccattgggatggtggcggctgctggaaccacc
agcgtgctgttttccgggtgccgtggggcgttcttcctgctgttgaaagcacgtctccat
cggatcctgagtctccggctcttctcccatgtggtgcaccaagacctggacttcttccag
ggagtgtcagcagctgagctcttggctcagttttccgtggaagtgccacgggtgtgcgag
acagcgccgaaaggagccaaccagctgttccgaagcctgggaatggccctggtggtgggg
gcattcatggtggggctggcaccggggctggcgctgctggcactgctggagctgcccctt
ggaatcgccaaccaccgcatccagagtgcccggaaacagtcccttcagcaatccatgctg
gaagcatctgcccggacagcctcaggggtgcaggaatctgttgccgccatggagacgatc
cgtatcttttcggcggaggaggaggaggaggagcagcacagctggaacctggccaaggag
ctgaggctgagggagcggatagacctggagctggcattcttcacccttgtccacagggtg
attgagctgaccatccgggtcctggtactcttccggagccaccagctgctccgtgacgga
tacatcactcccggggtcctggtcaccttcctgctgtaccaggacacagttggcagccat
gtccaggtgctgctctccggcttcaatgaatccgtgaccaatgcagctgccggacggaag
atctgggagtacctggatcggaaacccacagggaatgtcagggggacgcgggagcccccc
gagcttcagggacacgtcacttttcagaaggtctccttcgcatatcctgggaatccagag
cagcctgtgctgaaggatgtaaccttcgaggtgcgttccggggaggtgacagcactggtg
gggcacaatgggagcgggaagagcacaactgtggcactgctggagcggctgcgggatcct
gggagtgggaagatcctgctggatgggatcccgctgccagaatatgaacaccagtacctg
caccggaaggtggtgctggtggagcaggatcccgtcctgttttctggaacgatccgtgaa
aacgtcatgctggggctggagaactgcaaagagtcagagctgcgggaggctgccattgct
gctggagccatggacttcatccagggactggagcagggctgggacactgaggtgggggag
cgtggggggcggctggcagcaggggagcggcgccgtgtggccctggcccgggctctgctc
cggcgcccagccgtcctcatccttgacgagtcactggatgacggagacgagggggcggca
cagcgctggttgcgcactgggctggcccggaccgtgctggtcgtgtcccaccgtccacgg
gtgctggatgtggctgatcgccttgtggtgttggaccacggagctgtggtggaaactgga
acgccagcggagctgcgggaacgctgtggggtctacagccgcctgctccttggaggaggc
aggactggggggccagaggcccccaacatgggcagcgagaagggggctgcacttggcagg
gaataa
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