Hirundo rustica (Barn swallow): 120764827
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Entry
120764827 CDS
T09369
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120764827
03036 Chromosome and associated proteins [BR:
hrt03036
]
120764827
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
120764827
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
120764827
SLIK complex
120764827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
120764827
NCBI-ProteinID:
XP_039944818
LinkDB
All DBs
Position
W:9162637..9272226
Genome browser
AA seq
1786 aa
AA seq
DB search
MNGHSDEDVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSESGSETDTS
REKKQVQAKLPPKLDGSEFWKSSPSILAVQKSAVLKKQQQQKEASSDSGSEEGSSNSEDS
ADDSSSETKKKKHRDEDWQMSGSGSVSGTSSDSESEEDREKSSCEDSESDYEPENKVKSR
KPPSRIEPKSGKKIAGQKKRQLDSSDDDDYDKRGSRRQATVNVSYKEAEETKTDSDDLLE
VCGEDVPQPEEDEFETIEKFMDSRIGRKGATGAATTIYAVEADGDPNTGFEKSKEPGEIQ
YLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQ
QELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQTCI
DEYFSRNQSKTTPFKDCKILKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWC
KGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMN
AVVYLGDITSRNMIRTHEWIHPQTKRLKFNILLTTYEILLKDKSFLGGLNWVFIGVDEAH
RLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK
GREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKAL
SKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLL
IRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSED
FCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKAS
VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELF
KEPEGEEEEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPE
QNLRNWEEIIPEVQRRQIEEEERQKELEEIYMLPRMRNCAKQISFNGSEGKRSRRRRYSG
SDSDSVSERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAEL
VDKSEIDLRRLGELVHNGCIKALKDNSFGQERTGGRFGKVKGPTFRISGVQVNAKLVISH
EEELAPLHKSIPADPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIK
MDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEVQRLTGAGNSKRKKAR
SKKNRPTKAEKIKEEIKSDSSPPSEKSDDDEYNEDEIVSVKCPHKKIKAEENEEKPEPDI
DIKMEALEKRETKEKENKRHLKREKKEKEDKKELKNIKEKRESKLKESTQKEKEVKEEKA
NELKSENKEKNKKVSLLDIPVHITATSETVPISEDTEELDQRTFGVCKERMRPVKAALKQ
LDRPEKGLSEREQLEHTRQCLIKIGDHITDCLKEYTNPEQIKQWRKNLWIFVSKFTEFDA
RKLHKLYKHAIKKRQESQQHSDQNISNNVNTHIIRNPVVERQKENTNHDDSSRDSSDRQL
SQYYDHHKDRHQEDAYNKNDSRKRSYSAFSNGKDHRDWDHYKQDSRYYNDGKRRKLDDHR
SRDHRSNLEGSLKDSRPHSNHCSHSDHRIHSDHRSTSEHIHHKSSRDYRYHSDWQIDHRA
SGSGPRSPLDQRSPYGSRSPIGHRSPFERSSDHKSTPEHTWSSQKT
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagatgtaagaaacagtagtggtgagtcaagccagtcagat
gatgattctgggtcagcatcaggttctggatctggttcaagctctggaagcagtagtgat
ggaagtagcagtcaatcaggtagcagtgactctgagtctggttcagagactgacacatct
agagagaagaaacaagttcaagctaaactaccaccaaaacttgatggatctgagttttgg
aagtccagtccaagtatacttgctgtgcagaaatcagcagtgctcaagaagcaacaacag
cagaaggaagcctcatcagacagtggttcagaagagggttcatcgaacagtgaagattct
gcagatgactcttccagtgaaaccaagaagaaaaaacacagagatgaagactggcaaatg
tctgggtcaggatcagtatcaggaactagttctgattctgaatcagaggaagatagagag
aaaagcagttgtgaagatagtgaatctgactatgagccagaaaacaaagtcaaaagccgg
aaacctccaagcagaattgagccaaaaagtggcaaaaagattgcaggacagaaaaagagg
cagctggattcatcggacgatgatgactatgacaagagaggatctcgtcgccaggcaaca
gtcaatgttagttacaaagaagctgaagaaaccaagacagattctgacgacttgttggaa
gtttgtggagaagatgtcccacagcctgaagaagatgaatttgaaactatagagaagttt
atggatagtcgaattggccgaaaaggagccactggtgctgcaaccaccatctatgcagtt
gaggcagatggtgacccaaatactgggtttgaaaagtcaaaagagccaggagaaatacag
tatcttattaaatggaaaggctggtcacacatccataatacatgggaaactgaggaaaca
ctgaagcaacaaaatgttaaagggatgaagaaactggacaactacaagaaaaaggatcag
gaaacaaaacgctggctgaaaaatgcttctccagaagatgtggaatactataactgccag
caggaacttacagatgatctacataaacagtatcaaatagtggagaggataattgctcat
tcaaaccagaaatcagcagctggttatccagattactattgcaaatggcaaggtctgcct
tactcagaatgtagctgggaagacggtgctctcattgccaaaaaatttcagacatgtatt
gatgagtattttagcagaaaccaatccaagactactccatttaaagactgcaagattcta
aaacagaggccaaggtttgttgcactaaaaaagcaaccatcttatattggaggacatgaa
ggtttagaattaagagattatcagttaaatggactgaactggcttgcccactcatggtgc
aaagggaatagttgtattcttgcagatgaaatgggtctgggtaaaacaatacaaacaatt
tcttttctgaactacctgtttcatgaacatcaactgtatgggcctttcttgctagtcgtg
ccactttctaccttgacatcttggcaaagagagattcaaacttgggctcctcagatgaat
gctgtggtttacttaggagatataactagcagaaatatgataagaactcatgaatggata
catccacagaccaagcgattaaaatttaatatacttctaacaacttatgaaattttgctg
aaggataagtcattccttggtggtctgaattgggtatttataggagttgatgaagctcat
cgtttaaaaaatgatgattcccttctgtacaagactttaatagactttaagtctaatcat
cgtcttcttattactggaacccctctgcaaaactcccttaaagagctttggtctttgctg
cacttcatcatgccagaaaagttttcttcctgggaagattttgaagaggagcatggcaaa
gggagagagtttggttatgcaagtcttcacaaagaacttgaaccatttttgctcagaaga
gttaaaaaagatgtagaaaagtctttacctgctaaggttgaacaaattttgaggatggaa
atgagtgcattgcagaagcaatattacaagtggattttaaccaggaattataaagccctg
agtaaaggttcaaaaggcagtacctcgggctttttgaacattatgatggaactcaagaag
tgctgtaaccattgctacctcattaaaccaccagatgataatgaattctataataaacag
gaagccttgcagcatttaatacgtagcagtggaaaactaatccttcttgacaagctactg
attcgtctacgagaacgtggcaacagagtactgattttctctcagatggtgaggatgcta
gacatcctagcagagtatttgaagtatcgtcagtttccctttcagagacttgatggatca
ataaaaggggaattgaggaaacaagccttggatcattttaatgcagaaggctcagaggac
ttctgctttttgctgtccaccagagctggaggattaggtataaatttagcatctgctgac
actgtagttatatttgattctgattggaatccacagaatgatctgcaggcgcaggctaga
gctcataggattggacagaagaaacaggttaatatttatcgactagtcacaaaagcatca
gtagaagaagatattcttgaaagagccaagaaaaagatggtgttagatcacttagtaatt
cagagaatggacactacagggaaaactgtactacatacaggctctactccctccagctca
acaccttttaataaggaagagttatcagcaattttgaaattcggtgctgaggaacttttt
aaagaacctgaaggggaagaagaggagcctcaggaaatggatatagatgaaatcctgaag
agggctgaaactcgagaaaatgaaccaggtccactgactgtaggagatgagttgctttca
cagttcaaggtggctaacttttcaaatatggatgaagatgacattgagttggaaccagaa
caaaatttaagaaactgggaagaaatcattccagaagtccagcggcgacaaatagaagag
gaggaaagacaaaaagagcttgaagaaatatatatgctgccaaggatgagaaactgtgca
aaacagatcagctttaatggaagtgaagggaaacgcagtaggaggagaagatattctgga
tctgatagtgactcagtctcagaaagaaaacgaccaaaaaaacgtggaagaccgcgaact
attcctcgagaaaatattaaaggatttagtgatgcagagattagacggtttataaagagt
tacaagaaatttggtggcccacttgaaaggttagatgctatagctagagatgctgagcta
gttgataaatctgagatagaccttagacgtctgggagaacttgtacataatggatgcatt
aaggctttaaaggacaattcctttggccaagaaagaacaggaggtagatttgggaaagtt
aaaggcccaacattccgaatatcaggagtgcaggtaaatgcaaagctagttatttctcat
gaagaagagttggcaccattgcacaaatccattcctgcagatccagaagaaaggaaaaga
tatgtcatcccatgccacaccaaggcagctcattttgatatagattggggtaaggaagat
gattccaatctgttaataggtatctatgaatatggctatggcagctgggaaatgataaaa
atggatcctgatctcagtttgacacagaagattttacctgatgacccagataagaaaccg
caggcaaagcagttgcagacccgtgcagattacctcattaaattactgaataaagacctt
gcaagaaaagaagtgcaaagacttactggtgcaggcaattcaaagaggaagaaagcaaga
agtaagaagaatagaccaacgaaggctgaaaaaattaaagaagaaataaaaagtgactca
tcaccaccctcagaaaaatctgatgatgatgagtataatgaggatgagattgtttcagtg
aaatgtccacataaaaaaataaaagcagaagaaaatgaagaaaagcctgagccagatatt
gatataaagatggaagctctagaaaaaagagagacaaaagaaaaagaaaataagaggcat
ttaaaaagagagaaaaaagaaaaagaggataagaaagaattaaaaaatattaaagaaaag
agagaaagcaaactaaaagaatccacacagaaagaaaaagaagtaaaggaagaaaaggca
aatgaactcaaatctgaaaataaagaaaaaaataaaaaagtttcattgttggatattcca
gttcatattactgcaactagtgaaaccgttccaatatcagaagacactgaagaactggat
cagaggacatttggtgtgtgcaaagaaagaatgaggcctgttaaagcagcattgaaacaa
ttggatagaccagagaaaggcctttctgaaagggaacagctggagcatactagacagtgc
ctaatcaaaattggggaccacattactgattgtctaaaggagtacacaaatcctgaacaa
attaaacagtggagaaaaaacttgtggatttttgtctctaagtttacagaatttgatgcc
agaaagctgcacaagctgtataaacatgcaatcaaaaaacgccaagaatctcagcagcac
agtgaccagaatattagcaacaacgtgaatacacatataattagaaatccagttgttgaa
agacagaaggagaatacaaaccatgatgacagtagcagggatagttctgatagacaattg
tctcagtactatgatcatcataaggacaggcatcaggaagatgcttataataaaaatgac
tcaaggaaaaggtcctattcagccttcagcaatggaaaagaccacagagactgggatcac
tataaacaagacagcagatactataatgatggtaaacgtagaaagctggatgaccacagg
agcagagatcacaggtcaaacctggaaggaagtttaaaagacagtcggcctcattcaaat
cactgttcccattcagaccacaggatacattcagatcatcgttccacttcagagcatatc
catcataaatcttccagagattataggtaccactcagactggcaaatagaccacagagcg
tctggtagtggcccaaggtcaccattagatcagaggtctccttatgggtcaagatctcct
ataggacacagatctccatttgaacgctcatcagatcacaaaagtacacctgaacataca
tggagtagccagaaaacataa
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integrated database retrieval system
