Hirundo rustica (Barn swallow): 120764876
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Entry
120764876 CDS
T09369
Symbol
MEX3C
Name
(RefSeq) RNA-binding E3 ubiquitin-protein ligase MEX3C
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120764876 (MEX3C)
04121 Ubiquitin system [BR:
hrt04121
]
120764876 (MEX3C)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120764876 (MEX3C)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120764876 (MEX3C)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120764876 (MEX3C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
zf-C3HC4_3
KH_Vigilin
KH-I_KHDC4-BBP
Prok-RING_4
zf-RING_2
KH_2
zf-C3HC4
RING_XB3-XBAT31
KH_DEAH11_2nd
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
120764876
NCBI-ProteinID:
XP_039944928
LinkDB
All DBs
Position
W:10260114..10285943
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AA seq
555 aa
AA seq
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MGVARQRAGLAPPPDSLGEPRLGGAGEAAVRGEGDLELEDEDEEDHLAALLLLFTSSSPS
QPLPLLPALGSVLLSPTLDEQEAAAGAHDPEGMMTAMLSHAYGGGLSDDGAVGLCGEQTA
LIGGKSVNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRK
EDVAMAKREILSAAEHFSMIRASRNKSSPALGGLLCTPNLSGQMTVQVRVPYRVVGLVVG
PKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVNCAREEIEMHIAMRTGNYIKLNK
ENDFHYNGTDVSFEGGTLKSAWLASNPVPLSCTRMLSNSRNDSSSSLGSSSTDSCFGSNR
LADFSPSPFSTGNFWFGEMLPSVGTEDFTVDSPVYDSLSMPSQTIWTPFEPVNPLPGFGS
DPASNAKPQCRGRQPSTPCLSPTFPESLDHPLAGRVSSDPPSTGHQVGLPIYIPAFSNGT
NSYSSSNGGSTSSSPPESRQKNNCMMCFENQVVAALVPCGHNLFCLECANKICEKEVPSC
PVCQTAVTQAIQIHS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggcccggcagcgggcgggcttagcgccgccgcccgactccctcggggagccg
aggcttggcggagcgggggaggcggcggtgaggggcgagggagatctggagctggaagac
gaggacgaagaggaccacctggccgcgctgctgttgctcttcacgtcttcctcgccctct
cagccgctcccgctgctgccggcgttgggatccgtcctgctctcgcccactctcgatgaa
caggaggcagcggcgggggcgcacgatcctgagggcatgatgacggcaatgctgtcccac
gcttacggcggcggcctgagtgacgatggtgcggtgggcctctgcggtgagcagacggcg
ctgatcggcggaaagagcgtcaacaccaccgaatgcgtgcccgtgcccagctctgagcat
gtggctgagatcgtgggccgccagggttgcaaaataaaagcactaagggccaagacaaat
acttacattaagacccctgttcgtggagaagaacccgtctttgttgtcactgggcgaaag
gaggacgtagccatggctaaaagggaaattctctcagctgctgaacacttctccatgatc
agagcatcacgcaacaagagcagtcctgccctgggaggcctgctatgtacccctaacctg
tcaggtcagatgacagtccaagtcagggtgccttaccgtgtagttgggctggtggttgga
ccaaaaggagctacaatcaaaagaattcagcagcagacccatacctacatagtcaccccc
agcagggacaaggagccagtcttcgaagtcacaggaatgcctgaaaatgtcaactgtgca
cgtgaggagatagagatgcatatagccatgcgtactgggaactacattaagctgaataaa
gagaatgatttccattacaatggtacagatgtgagctttgaaggaggcactctcaagtct
gcatggcttgcatctaatcccgtccctcttagctgcaccagaatgctttctaattctagg
aatgacagctccagctccttgggaagtagttccacagattcctgttttggaagcaataga
ttggctgacttcagcccaagtccgttcagcacaggcaacttttggtttggagaaatgttg
ccttcagtgggcacggaagacttcacggttgactctcctgtgtatgactccttatcaatg
ccttcccaaaccatttggactccttttgaacctgtaaaccctctccctggctttggtagt
gaccctgctagtaatgccaagcctcaatgccgagggagacagccatctactccttgcctg
tcacccacatttccagaaagcctggatcacccactggctgggagagtgagtagtgaccca
cctagcactggccaccaagtaggccttcccatctacatccctgcattctccaatggcacc
aacagctattcatcttccaatggtggctccacatccagctcaccccctgagtcgagacag
aagaacaactgcatgatgtgcttcgagaaccaagttgttgcagccctggtcccctgtggt
cacaatctcttctgcctggagtgtgccaacaaaatctgtgaaaaggaagtcccatcgtgt
cctgtttgccagacagctgttactcaggcaattcaaattcactcttaa
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