Hirundo rustica (Barn swallow): 120764951
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Entry
120764951 CDS
T09369
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120764951 (ZC3H12B)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
120764951 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
120764951
NCBI-ProteinID:
XP_039945067
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All DBs
Position
W:11998366..12080752
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AA seq
834 aa
AA seq
DB search
MTAWSMVGKLKMEKRYSREDRNVEQDAGECSAESEEWTSSESEPEQPYFRSSTQWREKEV
STKPHRPLCRSPCLDRPSFLQSSITQDLKLDECKTNLDKEYQAKMDFALKLGYAGDQIQA
VLNKLGADALINDVLAELVRLGNKSESEGQSTASTTTGTLVPRGPCPKEIASPELSLEDE
VVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRKEQS
RPDAPITDQELLHKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYR
DLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQPCP
YGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSSSKGE
ISSEVKRVAPKRQSDPSIRSVAVEPEEKLSAARKSEASSVPSLVSALSVPTLPPPKSHAA
GALNTRSASSPVPGSSQFIHQKSSLEHMSSLQYPPILVTNSHGTSVSYIDQYPKYESLGD
YGYYSLLSDFSNLSISSIRNSDYYGADMDQGMYSRNSSPCPDNCLSHTSNDSYSSYNDLY
LGVADASPEDNVKSHRLPSKNCLQPFPHGYHEALNRGQSYGTEEPKQSLRKQSVSCLGLH
AQHSVVGARSTCPGECSVPQNVHPSTAQPSRALVMTRMDSISDSQLYESNPTRQRRPPLC
REQHASWDPLPCASDSYTYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGICGEP
RKPHIIPEHQYQTYKNLCNIFPPSVVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtctatggtagggaagctgaaaatggagaagaggtactccagagaagac
agaaatgtggaacaagatgcgggggaatgcagtgctgaatctgaggaatggacgagctca
gaaagtgagcctgagcaaccatacttcagaagcagtactcagtggagagaaaaggaggtt
tctaccaaaccacatcggccactctgccggtccccatgtctggatcgcccaagttttttg
cagagcagtatcacacaagacttgaagttagatgaatgcaaaacaaatttggacaaggaa
taccaagctaaaatggattttgctttaaagcttgggtatgcaggagatcagatccaggct
gtactgaataagttgggagcagatgcgctcatcaatgatgttctagcagagcttgtgaga
cttggcaacaaaagtgaatcagagggacaaagcactgccagcactaccactggtactctg
gtgccaagaggcccttgcccaaaggaaatagcaagccctgaattgtcactggaagatgaa
gtagtggataacagtgataacttgaggccaattgtcattgatggaagcaatgttgctatg
agccatgggaacaaagaaggattttcctgccggggaattcaactagctgttgattggttt
ctggaaaaaggacataaagatatcaccgtgtttgtacctgcatggagaaaagaacagtct
cgacctgatgcaccaattacagatcaagaactcttacataaattggagaaagaaaaaatt
cttgttttcaccccatctcgaagagttcagggaagaagagtagtttgctatgatgatcga
ttcatagtaaaacttgctttcgactcagatggcatcattgtgtcaaatgataactatcgg
gatcttcaaaatgaaaaaccagaatggaagaagttcatagaggagcggctgctaatgtat
tcttttgtgaatgacaaatttatgcctccggatgatcctttaggacgccatggtccaagc
cttgaaaatttcttaagaaaaaggccagttattcctgaacataagaaacaaccgtgtcct
tatggtaaaaagtgcacctatgggcacaaatgtaaatattaccacccagaacgtgcaaac
cagcctcaaaggtcagtagcggatgagcttcgaataagtgccaaattatctgctgtgaaa
actatgagtgagggagccttggccaaatgtggcacagggccatccagctccaaaggagaa
atcagttctgaagtgaaacgcgttgccccaaaacgtcagtcagatccaagcattaggtca
gtagctgtggagcctgaggaaaagttatcagcagcccggaagtccgaggccagctctgtc
ccatctctggtttctgcattaagtgtaccaacgctccctccaccaaaaagccatgcagct
ggtgcattaaatactcgttctgcaagcagtccagtgccaggttcctcacagttcatacat
cagaaatcctcactggaacatatgtccagtctgcaatatcctcctatactagtcaccaat
agccatggcacctcagttagctatattgaccagtatcccaaatatgagtcactgggggac
tatggctattactccttactcagtgatttctccaacttaagcataagtagtatccgtaac
tcagattattacggggctgatatggaccaggggatgtattctagaaactcaagcccctgt
cctgacaattgcttaagccatacaagtaatgattcttattcctcttacaatgacttgtat
ctgggtgtagcagatgccagtccagaagacaatgtgaagagccacagactgccatcgaaa
aattgtcttcagcctttccctcatggttaccatgaagccttaaatagaggtcagagttac
ggaactgaagagcctaagcaatctcttcggaaacagtcagtttcctgcttaggcctacat
gcccagcattccgttgttggagcgcggtccacttgtccaggagaatgctctgtgcctcaa
aatgttcatccatcaactgcacaaccaagccgtgccttggtgatgacaagaatggacagt
atttctgactcacagctttatgaaagtaaccctacaaggcagagacgaccacctctctgt
cgagagcagcacgcaagctgggatccattaccgtgtgcatcagactcttacacttaccac
tcgtatccactgagtaacaacctcatgcagccatgttatgaacctgtcatggtaagaagc
atgcctgagaagatggagcaactctggagaaatccctggattgggatatgtggtgaacca
cggaaacctcatatcatcccagaacatcagtatcaaacatacaagaacctctgcaatatt
ttccctccaagcgttgtcctttctgtgatggaaaagaatccccacatgacagatgcacaa
cagctggcagctatgattgttgccaaattaagaacagggcgttag
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