Hirundo rustica (Barn swallow): 120765058
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Entry
120765058 CDS
T09369
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120765058 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120765058 (SMARCA2)
03036 Chromosome and associated proteins [BR:
hrt03036
]
120765058 (SMARCA2)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120765058 (SMARCA2)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120765058 (SMARCA2)
Chromatin remodeling factors
BAF complex
120765058 (SMARCA2)
PBAF complex
120765058 (SMARCA2)
GBAF(ncBAF) complex
120765058 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
120765058
NCBI-ProteinID:
XP_039945235
LinkDB
All DBs
Position
Z:complement(3042396..3162578)
Genome browser
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPLSGGGPTPPQMTPSQPGPIIAGDPQVMNQPNRGPSPFSPAQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHAMSGTATGP
GSAPGMPGHTTAITPKTWPEGQAPDMSVSNAQQKLPAPAPSGRPSPAPAAAQPAATIPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEEEESSKLETDEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEEE
DEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctgggacctagcccaggaccagggccatctcctggctccgtt
cacagcatgatggggccaagtcctggtccgcccagtgtcccacatccaatgccgacaatg
gggcctacagattatccacaggaaggcatgcatcaaatgcataagtctattgatggcttg
catgaaaaaggaatggttgaagatgttcactgtggctccatgaagagtatgcgacctcct
catcctggaatgggtccacctcagagtccaatggaccagcatagccaaggttatatgtct
ccacacccatctccactaggagcaccggagcacgtgtccagcccgttgtctggaggaggt
ccaacaccacctcagatgactcccagtcagccaggacccattatcgcaggagacccacaa
gttatgaatcagcctaacagaggtccttcccctttcagccctgcacagctgcatcagctg
cgggctcagattctagcatacaaaatgctggctaggggtcagcccttgccagagaacctt
cagcttgctgtccagggcaagagaactctgcctggcattcaacagcagcagcctcccagt
gccttcaacagacagtctggtattggattacatgcaatgagtggtactgcaactggacca
gggtctgcaccggggatgcctggacatacaactgccattacccctaaaacttggcctgaa
ggccaagccccagatatgagcgtctccaatgcacaacaaaagcttccagcaccagctcct
agtgggaggccttctccagctcccgctgccgcccagcctgctgccaccatacctgggccc
tctgtgccacagcccccccctggacaaccttcacctattgtccagctgcagcagaagcag
aaccgcatcagccccatccagaagccacagggattggatcctgttgaaatactccaagaa
cgtgaatataggcttcaggctcgaattgctcacagaatccaggaactggagaacttgcct
ggttctctgccccctgatctgcgaaccaaagctacagtggagttgaaggcacttaggtta
ctgaatttccaacgccagttaagacaagaggtagtagcctgcatgcgtcgtgacacaaca
ctggagacagcactgaactccaaagcctacaaacgaagcaagcgccagactttgagagaa
gctcgtatgacagaaaagcttgaaaaacagcagaagatagaacaggagaggaagcgtagg
cagaagcaccaggaatacctgaatagcatattgcagcatgctaaagattttaaagagtac
caccggtctgtcgctgggaaaattcagaaactttctaaagctgtggcaacttggcatgcc
aacactgaacgtgagcagaaaaaagaaactgagagaattgagaaagaaagaatgaggaga
ctaatggctgaagatgaagaaggctaccgtaagctgattgatcaaaagaaagacagacgc
ctggcctacctgttgcagcagacagatgagtatgtggctaacttgactaacctggtatgg
gagcataaacaagcacaagcagccaaggagaagaagaagcgaaggagaagaaagaagaaa
gctgaagaaaatgcagaaggaatggcatctggtcttggtcccgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttggaccagaagcacccaaagcaagtcagctggatgcttggctggaaatgaaccct
ggctatgaagttgctcccagatcagatagtgaagatgaaagtggctctgagtacgaggag
gaggatgaggaagaagaatcaagcaaattagaaacagatgagaagatactcctggatccc
aacagtgaggaagtttctgagaaagatgcgaagcaaatcattgagacagccaagcaagat
gtggatgatgaatatagcatgcaatatagtgctagagggtcccagtcctactacactgtt
gctcatgcaatcaccgaaagggtggaaaagcagtcttcccttcttattaatggcacatta
aaacattatcagctccagggactggaatggatggtttctctctataataacaatctgaat
ggaattttagcagatgaaatgggactaggaaagacaatccagactattgctctcatcact
tacctgatggagcacaaaaggctcaatggcccctatctcatcattgttccgttgtcgact
ttatccaattggacatacgaatttgacaaatgggctccttctgtggtgaagatatcctac
aagggtacacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaat
gttcttttaactacttatgagtacataataaaggacaaacatatccttgctaagattcgg
tggaagtacatgatagtagatgagggccatcgaatgaagaaccatcactgcaagctgact
caagtcttgaatactcactatgtggcccctcggagaatcctgctgactgggactcctctg
cagaacaaattgcctgaactttgggctcttcttaatttccttcttccgaccattttcaag
agctgcagcacctttgaacagtggttcaatgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcatccgtcgtctccataaagtgcttcggccc
ttcctgctgagaagactgaagaaggaggttgagtctcagcttccagaaaaggtggagtat
gtgatcaaatgtgatatgtcagctcttcaaaagatcctgtaccgtcacatgcaagccaag
gggatccttctcacagatggttctgaaaaggacaagaagggaaaaggcggagcaaaaact
cttatgaacactatcatgcaattgagaaagatatgcaatcacccatacatgtttcaacac
attgaggagtccttcgctgaacatctgggctactcaaatggtgtcattaacggagctgaa
ctttatcgggcctcagggaagtttgagctactcgatcgtattctaccaaagttacgagct
actaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgaccattatggaagac
tactttgcgtttcggaatttcctttacctgcgtctcgatggcacaacaaaatcagaggat
cgagctgctctgctgaagaagttcaatgaacctgggtcacaatactttatcttcttgctg
agtacaagggctggagggctaggcttaaatctccaggctgctgacaccgttataatcttt
gatagtgactggaatcctcatcaggacttgcaggcccaggatcgagctcaccgaattggt
cagcagaatgaagtcagagtcctgcgactgtgcactgtgaacagtgtggaagagaagata
cttgctgcggcaaagtataagctgaatgtagatcaaaaagttattcaggcaggaatgttt
gatcagaaatcttcaagccatgaaaggagagcgttcctacaagctatattggagcatgaa
gaagaaaatgaggaagaagatgaagttcctgatgatgagacactgaatcagatgattgct
cgacgtgaggaggaatttgatctctttatgcgcatggacatggatcgtcgcagggaggat
gccagaaaccctaaacgtaaacctcgcctgatggaggaggatgaattgccatcctggatt
attaaggatgatgctgaagttgaaaggcttacatgtgaagaagaagaagagaaaatattc
ggacgaggatcgcgtcagcgcagggatgtggactacagtgatgctctcacagagaaacag
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaggtccggcttaaa
aagcgaaaaaggcgaagaaacgtggataaggattctgggaaggaggatggagagaaggca
aagaaaagaagaggcagacctcctgcagagaagttgtcgcccaatccacccaaactgaca
aaacaaatgaatgctatcattgatactgtgataaactacaaggatagttcaggacggcag
ctaagtgaagtcttcattcagctcccgtctaggaaagaactaccggagtattatgaattg
attaggaagccagtggacttcaaaaaaataaaggaaagaattcgcaaccataaatatcgg
agtcttggggatttagaaaaagatgtcatgctgctgtgtcacaatgcacaaacattcaac
ttggagggatctcagatctatgaggattccattgttcttcagtctgtgttcaaaagtgca
cgacagaagatagccaaagaagaggaaagcgaggatgaaagcaatgatgatgaagaggaa
gatgaagaggaggaatcggaatcagaatcaaaatcagtgaaagtcaaaatcaagttaaat
aagaaggatgaaaaaagtcgggagaagggaaaaggcaagaagaggcaaagcagagcaaaa
gccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
