Hirundo rustica (Barn swallow): 120765077
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Entry
120765077 CDS
T09369
Symbol
CUL4A
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03420
Nucleotide excision repair
hrt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120765077 (CUL4A)
09124 Replication and repair
03420 Nucleotide excision repair
120765077 (CUL4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120765077 (CUL4A)
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120765077 (CUL4A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrt04147
]
120765077 (CUL4A)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
120765077 (CUL4A)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
120765077 (CUL4A)
TCR (transcription coupled repair) factors
Cul4-CSA complex
120765077 (CUL4A)
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120765077 (CUL4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
ADH_zinc_N
DUF3137
Motif
Other DBs
NCBI-GeneID:
120765077
NCBI-ProteinID:
XP_058275203
LinkDB
All DBs
Position
2:complement(92694507..92729318)
Genome browser
AA seq
764 aa
AA seq
DB search
MADEPQKKPHLSALVGHTNGLTKPASLAATATRSTGGGGGATASSKKLVIKNFRERPKLP
DNYTQDTWQKLHEAVGAIQSSISIKYNLEELYQAVENLCSYKVSATLYKQLRQVCEEHVK
AQILQFREDSLDSLLFLKKINKCWQDHCRQMIMIRSIFLFLDRTYVLQNSVLPSIWDMGL
ELFRNHIISDKQVQTKTIDGILLLIERERNGEAVDRSLLRSLLSMLSDLQVYKESFEQRF
LEETNCLYAAEGQRLMQEREVPEYLHHVSKRLEEEGDRVITYLDHSTQKPLIACVEKQLL
GEHLSAILQKGLDSLLDENRISDLTQTYQLFSRVKGGQQILLQHWSEYIKNFGTTIVVNP
EKDKDMVQELLDFKDKVDHIIEVCFQKNEKFINLMKESFETFINKRPNKPAELIAKYVDS
KLRAGNKEATDEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSM
LSKLKHECGAAFTSKLEGMFKDMELSKDVMVQFKQYMQNQSDPGNIDLTVNILTMGYWPT
YTPMEVHLNSEMIKLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQ
TLVLLMFNEGDEFSFEEIKMATGVEDNELRRTLQSLACGKARVLIKNPKGKDVEDGDKFI
FNGDFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLL
VSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagccgcagaagaagccgcacttgtcggccttggtgggacacacgaacggg
ctaaccaagcccgcctcgctggccgccaccgccacccgctccacaggaggaggaggaggc
gcgaccgcctcctccaagaaactcgtgatcaagaacttcagagaaagacccaaattacca
gataattatactcaggacacctggcagaaacttcatgaagcggtgggagcaatacagagt
agcatttctattaaatacaaccttgaagagctctaccaggctgttgaaaatctctgttcc
tacaaagtctctgctacactgtacaaacagctgcgacaagtctgtgaagaacacgtgaaa
gcacaaatccttcagtttagagaagattctctggatagtcttttatttttaaagaagata
aataaatgctggcaagatcattgcagacaaatgatcatgatcaggagcattttcttattt
ttggatcgtacatatgtgcttcagaattcagtgcttccttctatatgggatatggggcta
gagttgtttaggaaccatatcattagtgacaagcaagttcagaccaagaccattgatgga
attctcctgctgatcgaacgagaacgaaatggtgaagctgtggacagaagtttgctgcgc
agtttgttgagcatgctctcggacctgcaggtttacaaggaatcatttgaacagaggttt
ctggaagagacaaattgtttatatgctgcagaaggccagagattaatgcaggaaagagag
gtcccagaatatcttcaccatgttagtaaacgtttggaagaagaaggagacagagtaata
acatacttagatcacagcacacagaaaccactgattgcttgtgtggagaagcagctgcta
ggagaacacttatcagctattttgcaaaaaggacttgatagcctgcttgatgaaaacaga
atatcagatttgacccagacataccagctgttcagccgggtaaaaggtgggcagcagatc
cttttgcagcattggagtgaatacatcaagaactttgggacaacaatagtggttaatcct
gaaaaagacaaggatatggtgcaagagctgctagattttaaggataaagtggaccatatc
atagaagtgtgctttcagaaaaatgaaaaatttataaacttgatgaaggagtcctttgaa
acatttatcaacaagagaccaaataagcctgcagaattgatagcaaaatatgtggattcc
aagttaagagctggtaataaagaagcaacagatgaagagctggaaagaatccttgacaaa
atcatgatcatatttagattcattcatgggaaagatgtgtttgaggcattttataagaaa
gacttggccaaaagactgctagttggaaaaagcgcatcggtagatgctgagaaatccatg
ttgtcaaagcttaaacatgaatgtggtgctgcttttaccagcaaactggagggcatgttc
aaggacatggaactgtccaaagatgtcatggtacagttcaaacagtatatgcagaaccaa
agtgacccaggaaatatagacctgacagtaaatatattaactatgggatattggccaact
tacacgcctatggaagtccatttaaattcagagatgataaagcttcaagaggtatttaaa
accttttacttgggaaaacacagtggtcgaaaacttcagtggcagaccactttagggcat
gctgtcctaaaggcagaatttaaggaagggaagaaggagtttcaagtatcgctctttcag
acattagtattgcttatgtttaatgaaggagatgaattcagttttgaagaaattaaaatg
gctactggtgtagaggacaatgaattaagaagaaccttgcagtctttagcttgtggaaaa
gcacgagtgttgattaaaaatccaaagggcaaggatgtagaagatggagataaattcatc
tttaatggtgatttcaagcataaattgtttagaataaagatcaaccagattcaaatgaaa
gaaacagttgaggagcaggtcagcacaactgaaagagtatttcaggacaggcagtatcag
attgatgctgctattgtacgaataatgaagatgaggaagactcttggtcataatcttctt
gtttctgaattgtataatcaactgaaatttcctgtaaagcccggagacttaaaaaagaga
attgaatctctcattgacagagactatatggagagagacaaagacaatcccaatcagtac
cattatgttgcataa
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