Hirundo rustica (Barn swallow): 120765088
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Entry
120765088 CDS
T09369
Symbol
LAMP1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03272
Virion - Hepatitis viruses
hrt03273
Virion - Lassa virus and SFTS virus
hrt04140
Autophagy - animal
hrt04142
Lysosome
hrt04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120765088 (LAMP1)
03272 Virion - Hepatitis viruses
120765088 (LAMP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120765088 (LAMP1)
04142 Lysosome
120765088 (LAMP1)
04140 Autophagy - animal
120765088 (LAMP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120765088 (LAMP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrt04147
]
120765088 (LAMP1)
04090 CD molecules [BR:
hrt04090
]
120765088 (LAMP1)
Membrane trafficking [BR:
hrt04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
120765088 (LAMP1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
120765088 (LAMP1)
Other autophagy associated proteins
RNautophagy/DNautophagy
120765088 (LAMP1)
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
120765088 (LAMP1)
CD molecules [BR:
hrt04090
]
Proteins
120765088 (LAMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
Motif
Other DBs
NCBI-GeneID:
120765088
NCBI-ProteinID:
XP_039945321
LinkDB
All DBs
Position
2:complement(92672170..92690721)
Genome browser
AA seq
416 aa
AA seq
DB search
MARGLLAAAALLGFLQASSSFEVKDSSGKVCIIADLTVAFSVEYKNNGQKEFVHFFLPQN
ASVDSQSSCGKDNASHPVLVLDFGAGHSLSLNFSESADKYQVEELVFHYNLSDATLFPNS
TTGGVKNVSHKSIIQAHMGTKYRCINSKHIDMKNVNVTFSNVTLEAYLTNGTFSVNKTEC
AEDMVSTTTVVPTTPKQTTSQAPITSPTPTSSPPNPAVGKYNVTGPNGTCVLAYMGLQLN
ITYPKKDEKMGLDLLNFIPHNTTSSGRCDNTSALLNLTFEKTRVIFHFALNASAEKFFLQ
GVNVSTTLPSEAKNPKFEASNNSMSELLASVGNSYKCSSEENLQVTDKALVSVFNVQIQI
FKIDGDKFGPVEECQLDENNMLIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcccgggggctgttggcggcggctgccctgctcggctttttacaggcttcctcttca
tttgaagtgaaagattcaagtggtaaggtctgcataattgctgatttgacagtagccttc
tcagtggaatacaaaaacaatgggcagaaagagtttgtacacttttttcttccacaaaat
gcttcagtagactcacagagctcatgtggtaaagataacgcctctcatccagttctggta
ttggattttggagcaggacattcattgagcctgaatttctcagaatctgcagacaagtac
caagttgaagagctagttttccactacaatctgtcagatgcaactttattcccaaattca
actacaggaggtgtgaagaatgtatcacataaaagtattattcaggcacatatgggcaca
aaatacagatgcatcaactccaagcacatcgatatgaagaatgtgaatgttacttttagc
aatgtcactttggaagcctatctcacaaatggcactttcagtgtgaacaagacagaatgt
gctgaagatatggtgtctactactactgtagtgcctacaactcctaaacagactactagc
caggctccaataactagcccaacaccaacatcatcacccccaaatcctgcagttggtaaa
tacaatgtgactggtccaaatggaacttgtgtactggcctacatgggcttacagcttaat
atcacctatccaaaaaaagatgaaaagatgggtttggatttgctgaatttcataccacat
aatacaacttcttctgggagatgcgacaatacgtctgccttgttgaacctgactttcgag
aaaacaagggttatcttccactttgcattgaatgcaagtgctgaaaaattcttcctgcaa
ggtgtgaatgtaagcacgaccctgccttctgaagcaaaaaatccaaaatttgaagcatcg
aacaacagcatgagtgagctgttagcttcagtagggaactcctacaagtgtagttctgag
gagaatctgcaggtcacagacaaagcccttgtcagtgtattcaacgttcagatccagatt
ttcaagattgatggagacaaatttgggccagtggaagaatgtcagctggatgaaaataac
atgctgatccctataatagtcggtgcagcccttgctggtcttgttctgatcgtcttgatt
gcttacctgattggcagaaagaggagccatgctgggtatcaaacaatttaa
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integrated database retrieval system
