Hirundo rustica (Barn swallow): 120765157
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Entry
120765157 CDS
T09369
Name
(RefSeq) transducin-like enhancer protein 1 isoform X1
KO
K04497
groucho
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04310
Wnt signaling pathway
hrt04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120765157
04330 Notch signaling pathway
120765157
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hrt04812
]
120765157
Cytoskeleton proteins [BR:
hrt04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
120765157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLE_N
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
WD40_RFWD3
HALZ
Motif
Other DBs
NCBI-GeneID:
120765157
NCBI-ProteinID:
XP_039945607
LinkDB
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Position
Z:complement(37455944..37536149)
Genome browser
AA seq
780 aa
AA seq
DB search
MFPQSRHPTPHQAAGQPFKFTIPESLDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRH
YVMYYEMSYGLNIEMHKQTEIAKRLNTICAQVIPFLSQEHQQQVAQAVERAKQVTMAELN
AIIGVRGLPGLPPTQQQLQAQHLSHGHGPPVPLTPHPSGLQPPGIPPLGSSAGLLALSSA
LGGQSHLAIKDDKKHHDADHHRDREPGTSNSLLVPDSLRSTDKRRNGPEYANDIKKRKVD
DKDSSHYDSDGDKSDDNLVVDVSNEDPSSPRASPTHSPRENGIDKTRLLKKDASSSPAST
ASSGSSTSLKSKEMGLHEKASTPVLKSSTPTPRGDVPTPGTSATPGLRPGLGKPPTMDPL
VNQAAAGLRTPLAVPGPYPAPFGMVPHAGMNGELTSPGAAYASLHNMSPQMSAAAAAAAV
VAYGRSPMVGFDPPPHMRVPGIPPNLAGIPGGKPAYSFHVTADGQMQPVPFPPDALIGPG
IPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRD
NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCF
SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ
LQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCG
KWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgttcccccagagccggcacccgaccccgcaccaggctgcgggccagcctttcaaattc
accattccggagtcgctggaccgcatcaaagaagagttccagttcctccaggcgcagtac
cacagccttaaattggaatgtgagaaactggcaagcgaaaagacagaaatgcagagacat
tatgtgatgtactatgaaatgtcatatggattaaacattgaaatgcacaaacagacagaa
atcgcgaagagattgaatacaatttgtgcacaagtcatcccatttttgtctcaggaacat
cagcaacaagtggcccaagctgtagaacgtgccaaacaagtgaccatggctgaattgaat
gccatcatcggggtacgtggccttccaggtctacctcctacacagcagcagttgcaggcc
cagcacctctcccatggccatggacctccagtgcctctaacgccgcatccatcaggactt
cagcctccaggaatccctccacttggaagcagtgctggccttcttgccctctccagtgct
ttgggtgggcagtctcacttggcaataaaagatgacaagaagcatcacgatgcagaccac
cacagagacagagagccaggcacaagtaattctctgttggtccccgacagtctacgaagc
acagataaacgcaggaatggccctgaatatgccaatgacatcaaaaagagaaaggtggat
gataaggattccagccactatgacagtgatggggacaagagtgacgataacttggttgta
gatgtatccaatgaggatccttcttccccaagggcaagtcccactcattcaccacgtgaa
aacggtatagataaaacccgcctactgaagaaggatgcctccagcagtccagcatctaca
gcctcttcaggaagttccacttccctcaaatccaaagaaatgggcctgcatgaaaaagcc
agcacgcctgttctgaaatccagcacaccaactcctcgaggtgatgtgccaaccccaggc
actagtgcaactccaggactccgtccaggccttggcaaacctccaacaatggaccctctg
gttaaccaagctgctgcaggtttgcggacaccactggcagtaccaggaccgtaccctgct
ccatttggaatggtacctcatgctggcatgaatggagagttaaccagtccaggtgcagcc
tatgccagtctgcacaatatgtcaccccagatgagtgctgctgctgctgcagctgccgtg
gttgcctatggaagatctcctatggttgggtttgatcctcctcctcacatgagagttcct
ggaatccctccaaacctagcagggattcctgggggaaaaccagcctactcctttcatgtt
actgcagatggtcaaatgcagccagttcctttccctcctgacgccctcatcggtccagga
atccctcgccatgcccgtcagatcaacaccctgaaccacggggaagttgtgtgtgcagtt
accatcagcaaccccacgagacacgtgtacacaggtgggaagggctgtgtcaaggtttgg
gacatcagtcagcctggcaacaagagccctgtctctcagctggactgcctgaacagagat
aactacatccgctcctgcaaattgctgcccgatggatgcaccctcatcgttggcggggaa
gccagcacattatccatatgggacctggcagctccaactcctcggataaaagcagagctg
acatcctcagcacctgcctgctatgctctggctatcagccctgattccaaggtgtgcttt
tcctgctgcagtgatgggaacattgcagtgtgggatttgcacaatcagacattggtcagg
caattccagggccacacagatggagccagctgtattgacatttctaatgatggtaccaag
ctctggacaggaggtttggataacactgtcagatcctgggacttgagagaagggagacag
ctacaacagcatgacttcacatcacagatattttcacttggttattgtcctactggtgaa
tggttagctgtgggaatggagagcagcaatgtcgaagtgctacatgtaaataaaccagac
aagtatcaactgcaccttcacgagagctgtgtattgtcactcaagtttgcttactgtggt
aaatggtttgtgagtactgggaaagataaccttcttaatgcatggagaactccttacgga
gccagtatcttccagtccaaagaatcttcatcagtgcttagctgtgacatctctgtggat
gataagtacatagtcactggctctggagacaaaaaggctacagtctatgaagttatctac
tga
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