Hirundo rustica (Barn swallow): 120765191
Help
Entry
120765191 CDS
T09369
Symbol
THBS4
Name
(RefSeq) thrombospondin-4
KO
K04659
thrombospondin 2/3/4/5
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04145
Phagosome
hrt04510
Focal adhesion
hrt04512
ECM-receptor interaction
hrt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120765191 (THBS4)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120765191 (THBS4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
120765191 (THBS4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120765191 (THBS4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120765191 (THBS4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrt04147
]
120765191 (THBS4)
00536 Glycosaminoglycan binding proteins [BR:
hrt00536
]
120765191 (THBS4)
Membrane trafficking [BR:
hrt04131
]
Endocytosis
Phagocytosis
Opsonins
120765191 (THBS4)
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120765191 (THBS4)
Exosomal proteins of colorectal cancer cells
120765191 (THBS4)
Exosomal proteins of bladder cancer cells
120765191 (THBS4)
Glycosaminoglycan binding proteins [BR:
hrt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120765191 (THBS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
120765191
NCBI-ProteinID:
XP_039945695
LinkDB
All DBs
Position
Z:7596039..7636113
Genome browser
AA seq
954 aa
AA seq
DB search
MGCESGAALLLLPLALQLCPARAAAPAPRVFDLLPYSNKRVVLNFLQQAFGDPMLNEVYL
LSTFKLQPKSTATVFGLYSSADNSKYFEFTVMGRMSKAVLRYLKSDGRLNSVIFSNIQLA
DGKPHAVILWLSGLQQGLSTIELYLDCLQVGAIEDLPKPFSALSQKVVAAELRTLQEKKP
QDTLDELKLVTGGTLAEVGNLQDCFLQQIEPVPQYTGDFNRQLMGQMMQMNQILGDVKDL
LRQQVKETTFLRNTIAECQACGLGTVSFPTQLPRRTKPKCEVNSCFRGVRCMETAEGFQC
GPCPEGLTGNGVTCSDIDECRYNPCFPGVRCVNTAPGFRCETCPPGYTGQTVQGIGLSYA
KSNKQVCLDIDECQNGGLGLCVPNSHCINTLGSYHCGQCKPGYTGDQTRGCQAEQSCRNR
ALNPCSIHARCIEERRGEVTCICGIGWAGDGYICGKDVDIDGYPNEELSCSAENCRKDNC
RFVPNSGQEDADGDGIGDACDDDADGDGIPNEQDNCVLVPNVNQRNSDQDIFGDACDNCR
NVLNNDQRDTDGDGKGDACDDDMDGDGVKNLLDNCQRIPNEDQEDTDNDGVGDACDSCPT
ISNPNQSDVDNDLVGDSCDTNQDSDGDGHQDSTDNCPTVINSSQLDTDKDGLGDECDEDD
DNDGIPDLLPPGPDNCRLVPNPGQEDDNGDGVGDVCESDFDQDTVIDRIDVCPENAEITL
TDFRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHV
NTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGPGE
HLRNSLWHTGDTNDQVRLLWKDPRNVGWKDKVSYRWFLQHRPQIGYIRARFYEGSDLVAD
SGVTIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFQAQQLGVGDI
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcgagagcggcgccgcgctgctgctgctgccgctcgccctgcagctgtgcccg
gcccgcgccgccgcgcccgcaccccgagttttcgatcttcttccttattccaacaagcgt
gtagtactgaacttcttgcaacaagcatttggggatcctatgctgaatgaagtgtacttg
ctctcaacattcaaattacagccaaagagcacggccactgtttttggcctatattcatca
gctgacaacagcaagtattttgaatttacagtaatgggacggatgagtaaagcggtgctg
cgctatctgaagagtgatgggaggctgaattccgtgatctttagcaacatccagctggct
gatgggaaaccccacgctgtcatcttgtggctgagtggcctgcagcagggattgagcacg
atagagttgtatctggactgcctgcaagtaggtgccattgaggacttgccaaaaccattt
tcagcactgtctcagaaggtggtggcagctgagttgcgcactctccaggagaagaagcca
caggatacactagatgagctaaagctggtaactggaggaacccttgctgaagtgggaaac
ctgcaggattgttttcttcaacaaattgagcctgtacctcagtacactggtgattttaat
aggcagctgatgggtcaaatgatgcagatgaaccaaatactgggagacgtgaaagacctt
cttagacaacaggtcaaagaaacaacttttctgagaaataccatagctgagtgccaagca
tgtggtttaggcactgtgagttttccaactcagcttcctaggcgcactaaaccgaaatgt
gaagttaattcctgcttcaggggagtgaggtgcatggagacagcagaaggatttcagtgt
gggccttgccctgaaggactcacgggaaatggagttacgtgctcagatattgatgagtgt
cgttacaacccttgcttccctggcgtgcgatgtgtgaacactgctccaggtttccgatgt
gagacctgtcctccaggatatacgggacaaaccgtgcaagggataggactcagctacgcc
aagagcaataagcaggtctgcttagatattgatgaatgtcagaatggaggacttgggctc
tgtgttccgaattcccattgcataaacactttggggtcttaccactgtggccagtgcaaa
ccaggatatacaggagaccaaaccaggggatgtcaagcagaacagagctgtaggaatcga
gcccttaatccgtgcagcatccatgcccgttgtattgaggagaggagaggagaggtgaca
tgtatttgtggcattggatgggctggtgacggttatatttgtggaaaagatgttgacatt
gatggctaccctaatgaagaactctcatgctctgctgaaaactgcagaaaggacaattgc
agatttgtcccaaactctgggcaagaagatgctgatggtgatgggattggagatgcctgt
gatgatgatgcagatggagatggcattcccaatgagcaggataactgtgttttggttccc
aatgttaaccagagaaacagtgaccaagatatattcggagatgcttgtgacaactgccgt
aatgtcctgaataatgaccagagggatacagatggtgatgggaaaggagatgcttgtgat
gatgacatggatggagatggtgttaagaaccttttggataattgtcagaggatccccaat
gaagaccaggaggacacagataatgacggtgttggtgatgcctgtgacagctgccctaca
atcagcaacccaaaccagtcggatgtcgacaatgacctggttggagattcctgtgatacc
aatcaggacagcgatggtgatgggcaccaggacagcacagacaattgccctaccgttatt
aacagctcccagctggacacagataaagacgggctgggtgatgagtgtgatgaggatgat
gataatgatggcattcctgacctcttgcccccgggccctgacaactgcaggctggtcccc
aacccagggcaggaagatgataatggtgatggagttggtgatgtctgtgagtctgacttt
gaccaggatacagtgatcgatcgcatcgatgtgtgccctgagaatgcagagatcaccctg
acagacttcagggcctatcagacagtggtgctggacccagagggggatgcgcagattgac
cccaactgggtggttctgaaccaggggatggaaattgtgcagactatgaacagtgatcct
ggccttgctgttggttacacagcttttaacggcgtcgactttgagggcacttttcatgtg
aacacagtgacggatgacgactacgctggctttatttttggttatcaagacagctctagt
ttttatgtagtcatgtggaaacagacagaacagacgtactggcaagcgactcccttccga
gctgttgcagagcccggcattcagctaaaggctgtgaaatccaagacaggtcctggcgaa
cacctccgcaactccctctggcacacaggggacaccaacgaccaggtcaggctgctgtgg
aaggatccccgaaatgtagggtggaaagacaaagtctcgtatcgctggttcttgcagcac
aggcctcagattggttacatcagggcaagattttatgaaggctctgacctagtggcagac
tctggtgtaactatagacaccacaatgcgtggaggacggcttggagttttctgcttctct
caggaaaacattatttggtccaacctgaaatatcgctgcaatgacaccatcccagaggac
ttccaagaatttcaagcgcagcaattaggtgttggggatatttaa
DBGET
integrated database retrieval system
