Hirundo rustica (Barn swallow): 120765361
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Entry
120765361 CDS
T09369
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120765361 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120765361 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
hrt03016
]
120765361 (ZCCHC7)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
120765361 (ZCCHC7)
Transfer RNA biogenesis [BR:
hrt03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
120765361 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
zf-CCHC_3
Tt1219-like
Motif
Other DBs
NCBI-GeneID:
120765361
NCBI-ProteinID:
XP_039946055
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Position
Z:complement(82308262..82395129)
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AA seq
580 aa
AA seq
DB search
MDQNSESSLSRMFTGYDDPENTEVYEDELYPEESSSEQSVDSEVEFHLYSQIHYSQDLGE
TSTLEMDEEADAGEAMSQSSGLTEKQDKDEKLTELSGGGIQLPDEPEVIILSDTPDEDSI
YKSKARRSRCSSAQGGVHIPPVPSTPNHTKAAGCNAPCPPESGKGTPRQRNSTIGRPTPT
CSAGPQAIHDVLFIDNSSEEESLSSDSDNVESWMLLGAGVDDRDGDIMLNLEGCGTPVHR
GKIDVNWSISHKDLEAQISNYVGVRHSSMRYYAADKNVTCRNCHRPGHLSKNCPTPKKVP
PCCLCAGRDHLQHSCPARFCLNCCLPGHYFKECLERAYWNKHCNRCDMKGHYADACPEIW
RQYHLTTKPGPIKAASSHSERSVSVYCYNCSRKGHFGYECSEKRMQGNMFPTSPFVYYYD
DECDIKRRANRLKRKVADLQEAGLLPEQSETPVQEEQLEVPSHKKKSKLWKEPRKQSRNS
EQQKKMKVSRAKKPQEEKHRRGEPEDFPRGFKQQGCKGSRVRHKFLFQAFSGSKAVCVQQ
PLEGAKRKKKLKKQKNISPDSKDNLFLIKQRKKKSKQKSW
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaactcagagtcttcactttccagaatgtttaccgggtatgatgatcccgag
aatactgaagtgtatgaagatgaactttatcccgaggaatcatccagtgagcagagtgtg
gatagtgaggtggagtttcatctctacagccagatccactattcccaggatcttggtgaa
accagcacactggaaatggatgaagaagctgatgctggagaagccatgagtcaaagttca
ggtctaactgagaaacaggataaagatgagaagctcactgaactcagtggtggtggtatt
cagcttccagatgagcctgaggtcatcatcctgtccgatacaccagatgaagacagcatc
tacaaaagcaaggcaaggcggtcgagatgctcttcagctcaaggtggagtgcacatcccc
ccggtgccttccacaccaaatcacaccaaagctgctggatgtaatgccccgtgtccccct
gaatctggtaagggcacaccaaggcagagaaacagcaccatagggagacccaccccaacc
tgttctgctggacctcaagccatccacgacgtgttgttcatagacaacagctcggaggag
gagagcttgagctctgacagtgataatgtcgaaagctggatgctcttgggagctggtgtt
gatgacagggatggagacatcatgctgaaccttgagggctgtggcactcctgtccacaga
ggaaaaattgatgtgaactggtccatctctcataaggatttagaggcgcagatctccaac
tatgtgggcgtgaggcacagcagcatgcggtactacgcagctgacaaaaacgttacttgt
aggaactgccacagaccaggacatttgtccaagaactgtcccactccaaagaaagttcct
ccgtgctgtctgtgtgcaggaagagaccatctgcagcacagctgcccagcacgtttctgt
ctgaactgctgcttgcccgggcactatttcaaggaatgcctggagagagcctattggaac
aaacactgcaaccgctgtgacatgaagggccactatgctgatgcttgcccagaaatatgg
aggcagtatcacctaacaacaaagccaggacccatcaaagcagccagttcccactcggag
cgctctgtgtccgtgtactgctacaactgctcccgcaaaggacacttcggatacgagtgc
tcagagaagcggatgcagggaaacatgttccccacttctccctttgtctactactacgat
gatgaatgtgatatcaagaggagagccaacaggttaaaaagaaaggtggcagacctgcag
gaagctggtcttctgccggaacagtctgaaacaccggtgcaggaagaacagcttgaggtg
cccagccacaagaaaaagagcaaactttggaaagaaccgaggaagcaaagccggaacagt
gagcagcaaaagaagatgaaagtgtcccgggcaaagaaaccccaggaggagaagcacagg
aggggtgaaccagaggacttccctcggggattcaagcagcaggggtgcaagggcagcagg
gtccgccacaagttccttttccaggcattctcaggcagcaaggccgtgtgtgtgcagcag
cctctagaaggtgccaaaaggaagaagaaattgaaaaagcagaaaaatattagtcctgac
agcaaggacaatctattccttataaaacagcggaagaagaagtccaaacagaaatcttgg
tga
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