Hirundo rustica (Barn swallow): 120765390
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Entry
120765390 CDS
T09369
Symbol
RNF180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120765390 (RNF180)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120765390 (RNF180)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120765390 (RNF180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
120765390
NCBI-ProteinID:
XP_039946119
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All DBs
Position
Z:complement(9515957..9584086)
Genome browser
AA seq
565 aa
AA seq
DB search
MNNQEAGVLRCWRCRKCIANSGFLAKCNGEKPSKISQPSAAAQNSFNVWHVSLEAIPEWV
KCVIEKAQWTVGKLHCPFCEACLGGFNFVCDRECSCRQLVNRHFCKNRTEHQLPFSVKLS
KSSEKHLLLKIQSGFNKDTCHEVVTATLEIKNQGLSYTAGSNNGAGRLTEALCLEVRAPR
NEIESKKLPLKALNQKINLPASNLIKDASIVKPFHRRSHSLDLNMRERLVLSSVLHETCS
TGTFYRGQNENPPAYMQGSLQLESTRKGGNSFQGLYSSSADILQNQFQVTSITTLLHRET
ESECDFEVTGQSSGSVIADGSLFVMNFSSPTRTVEDEQYITPGGLVQPMSISFNQKLSKR
ERNKSKSLRRKQRRQEQCLQKQPANDNLHADDEHELRGDKESYLCAVCLDVYFNPYMCYP
CHHIFCEPCLRMLAKDNPASTPCPLCRTTIARVFFQTDLNNSTRSFFPMEYLNLKENFQK
SSSAKWPLPSCKKAFRVFEGFRRRSNTVTRRHFPHAAHRMDYMDFEDDSRGWRFDMDMVI
IYIYSVNWIIGFIIFCFLCYFFFPL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccaagaggctggtgttctccgttgctggagatgtaggaaatgtatagcaaat
tctggttttcttgcaaaatgtaatggggaaaaaccatccaaaatatcacaaccttcagct
gctgctcagaattctttcaatgtatggcatgttagcttagaagccattccagagtgggtg
aaatgtgtcattgaaaaggcacagtggacagttggaaaactgcactgtccattctgtgag
gcctgcttagggggctttaactttgtttgcgacagagaatgttcctgcagacagttagta
aatagacatttctgcaaaaataggactgagcatcagctacctttctctgttaaattgtca
aaatcatcagaaaaacatttgcttctcaaaattcagtctggttttaacaaggatacctgc
catgaagtggtaactgcaactttagaaatcaaaaatcaaggactttcctacacagctgga
agtaataatggtgctggaagattaacagaagcactctgtctagaagtaagagctcccaga
aatgagatagaaagtaaaaaacttcccttaaaggcattaaatcaaaaaataaatctccct
gcttccaatcttataaaagatgcaagcattgtcaaaccttttcacagaaggtcacatagc
ttggatttaaatatgagggaaagacttgttttgtcatctgtgttacatgaaacttgcagc
acgggaacattttaccgtggccaaaatgaaaatccacctgcttacatgcaagggagtctg
caattagagtccaccaggaaaggtggtaattcttttcagggtctgtatagctccagtgct
gacatactacaaaaccaatttcaagttacttccattaccacattactacacagagagaca
gaaagcgagtgtgattttgaagttactggacaatcttctgggagtgtcattgctgatggg
tcattatttgtgatgaacttttcctcgcctacaaggactgtagaagacgaacagtacatc
acacctggtggtcttgtgcagcctatgagtatttccttcaaccaaaagctgagtaagaga
gaaagaaacaagtcaaaaagcctgaggagaaaacaaagaaggcaagaacaatgtctacag
aagcaacctgcaaatgataacctgcatgcagatgatgagcatgaactcagaggagataaa
gaaagctacctctgtgccgtgtgtctggatgtttatttcaatccctacatgtgctatcca
tgccaccatatcttttgtgaaccttgcttaaggatgcttgccaaagataatccagccagc
actccatgtccactgtgtcgcactacaattgccagagtctttttccaaacagatttgaat
aactctaccagatcttttttccctatggaatatttgaatctaaaggaaaattttcaaaaa
tccagttctgctaaatggcctctaccaagctgcaagaaagcattcagagtttttgaaggt
tttcgaaggcgctcaaatactgtaacaaggaggcatttcccacatgctgctcacaggatg
gactatatggacttcgaggatgatagccgtggatggcgctttgatatggacatggtgatc
atttacatttattcagtcaactggataataggatttattattttctgtttcctttgttat
ttctttttccctctttag
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