Hirundo rustica (Barn swallow): 120765432
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Entry
120765432 CDS
T09369
Symbol
PTCD2
Name
(RefSeq) pentatricopeptide repeat-containing protein 2, mitochondrial
KO
K17711
pentatricopeptide repeat domain-containing protein 2
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hrt03029
]
120765432 (PTCD2)
Mitochondrial biogenesis [BR:
hrt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
120765432 (PTCD2)
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
MRP-S27
PPR
ARM_TT21_5th
PPR_long
PPR_3
ANAPC3
PPR_1
Mtf2
DED
Motif
Other DBs
NCBI-GeneID:
120765432
NCBI-ProteinID:
XP_039946220
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Position
Z:4187172..4204013
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AA seq
407 aa
AA seq
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MAPRPEEAGGGEGEAASAPPRGPGREMAAVLAGGSGRAVREAARRSAVRPPAPGGWGCAP
AGKRYLLTEEHIKLQEFQQMKVAIRNELHGSKDQYFKNIKEKLRKNGIILRNELKNLLHL
CQTSSDVELARKVIYRYHEQNGITALHNFKFGPLFMRLCYELDLERPAVELIKDQNLRGF
FSDSTSFHILMTMLFKKGHFESALEVLVEMKKQGIPFNKETYLLAVAICYKLGNPESAKI
SVRLLEEAQLKGDTLPLRAYCFAMATALKQNDVEQAKLYCSQIMRNENKLYSNLKVLVQL
RSGLLKQVINTLEEAVEVDTPPFVKRTEFSEQVLATVREKMEENPDLSVKLGNICTKLQA
SGQITMCTLEDMLFQIPSSKKTTTKLLNRKQSGYQGAYPLWSNLLLE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaggccggaggaggcgggcggcggcgaaggggaggctgcgagcgccccgccc
cgcgggcccggccgtgagatggcggcggtgctggcgggcggctccgggcgggcggtgcgg
gaggcggcgcggcgctcggcggtccgcccgcccgccccgggcggctggggctgcgcgccc
gcagggaagcggtatctcctaacagaagaacatataaagttacaagaatttcagcagatg
aaagtggcaattagaaatgagcttcatggcagtaaagatcaatattttaaaaacattaaa
gaaaaactaaggaaaaatggaataattctcaggaatgaattaaaaaatttgctgcattta
tgtcagacttcatctgatgtggagctagccagaaaagttatttacaggtaccatgaacag
aatggaatcacagccttacataattttaaatttgggccactttttatgaggctgtgttac
gagctagaccttgaaagaccagcagtagaacttatcaaagatcagaatttgcgtggtttt
ttctcagacagtacatcattccatattttgatgactatgttgtttaaaaagggccatttt
gaaagtgctttggaagttctggtagaaatgaaaaaacaagggatacctttcaacaaagaa
acctatctacttgcagttgcaatatgctataaactgggcaaccctgagtctgccaaaatc
tctgtgaggctgcttgaagaggcacagctgaaaggtgacacgttaccactgcgagcatac
tgctttgcaatggcaactgctctcaagcagaacgatgtagagcaagccaaattgtattgt
tcccagataatgagaaacgagaacaaactatacagtaatcttaaagtccttgtccagctc
agatctggtttgctaaaacaagtaataaatacattagaggaagcagtggaagtagatact
cctccctttgtgaaaagaactgagttttctgagcaggtgctggctacagtcagggaaaag
atggaagagaaccctgacctttctgtcaaattaggaaatatttgtacgaaactacaagct
tcaggacagataaccatgtgcacactggaagacatgcttttccagattcctagttcaaag
aagaccactacaaagcttttaaatcggaaacaatcgggctatcagggtgcctatccactt
tggtcaaatctgttgttagaatag
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