Hirundo rustica (Barn swallow): 120765487
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Entry
120765487 CDS
T09369
Symbol
PUM3
Name
(RefSeq) pumilio homolog 3
KO
K14844
pumilio homology domain family member 6
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120765487 (PUM3)
03009 Ribosome biogenesis [BR:
hrt03009
]
120765487 (PUM3)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120765487 (PUM3)
Ribosome biogenesis [BR:
hrt03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120765487 (PUM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
Arm-DNA-bind_2
Motif
Other DBs
NCBI-GeneID:
120765487
NCBI-ProteinID:
XP_039946331
LinkDB
All DBs
Position
Z:2792009..2857910
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AA seq
639 aa
AA seq
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MESKGKKKFVGKSGKGPRGKAPRGKRKFKKDNDSGAAKKVFNKGDEEGKPKSISKKFIKG
QLRPGNAAVKQFKNKQQPEKFSKKRKLQDGEEEGPDSKKPKWTDFKKKKKELKQTRQIND
KSNYDIILKSKQIWESIRRKKCDKEKREKLMNELQKLIHGKIKNLAFAHDSTRVIQCFIQ
YGNEKQRQETFEELKDSLVELSKSKYSRNIVKKFLMYGTKAQVAEIIKSFKGHVKKMLRH
AEASAVVEYAYNDKAILEQRNMLTEELYGNTFQVYKTPAVPTLDKVLEAQPEKREAILDE
MKQTLTPMAQKESVIKHSLVHKVFLDFFTYALPKQRSEMIEAIREAVIYLVHTHDGARVA
MHCLWHGTPKDRKVIVKTMKMYVEKIATGEFSHLVLLAAFDCIDDTKLVKQLIISEIKAS
LPNIINNKYGKKVLLYLLSPRDPAHFVPEIITLLQQGDGNAYSKKNTELRRRELLEAISS
PLLEYLQEHTQEVVIDKATFVLVADILRTALGDIQPALDAIAKLAAEELVPGGRDGQLHI
AEHPAGHLVLKWLIEQDEKMRENGKEVCFGRTLVEHVGMENLKTWAEVNRGAIILCCLLR
STDETVASTVKKGLKKLIPKLKQNKNVKGIEALLEKLTS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggagagtaagggtaaaaagaagttcgtggggaagagtgggaagggacctcgtggaaaa
gcgccgcgcgggaaaaggaaatttaaaaaagataatgattcaggggcagcgaaaaaagtc
tttaacaaaggagatgaggaaggaaagcctaaatccatttccaagaaatttattaaagga
cagttaagacctggaaatgctgctgtcaaacaattcaagaataaacagcaaccagaaaag
ttttcaaagaagagaaaactccaggatggtgaagaggaagggccagattctaagaagcca
aaatggactgacttcaaaaagaaaaagaaagagttgaagcaaaccagacaaattaatgat
aaaagtaattatgacataattttaaaatcaaaacaaatatgggaaagcataagaaggaaa
aaatgtgataaggagaaacgagaaaagctgatgaatgaactacagaagcttattcatggg
aaaattaaaaatctggcgtttgcacatgattcaacccgagtgatccagtgctttattcag
tatggtaacgagaaacaaaggcaagagacatttgaggaattgaaagatagcctagtagag
ttgagcaagtcaaaatattccagaaatattgtgaagaagtttcttatgtatgggacaaag
gcacaagttgcagaaataataaaaagttttaaaggccatgtgaaaaaaatgctccgtcac
gccgaagcatctgctgtagtggaatatgcatataatgacaaagcaattctggagcagagg
aatatgctgacagaagaactgtatgggaacactttccaggtttacaagacaccagctgtc
ccaacactggataaagtgctagaagctcaacctgaaaagagagaggccatcttggatgaa
atgaagcagactcttacaccaatggcacaaaaagagtcggtgataaagcactcactggta
cataaagtatttttggactttttcacttatgctcttccaaaacaaagatctgaaatgata
gaagctatcagagaggctgtcatctacctggtacacacgcacgatggagcccgagtagcg
atgcactgtttatggcatggcacccccaaggacagaaaagtcattgtgaaaactatgaag
atgtatgttgagaagatagcaacgggtgaattttctcatctggtcttactggcagcattt
gattgcattgatgacactaaacttgtgaagcagttaattatatcagaaataaaggcttct
ttgcccaatataataaacaacaaatatggaaagaaggtcttgttgtacttgctaagtcct
agagatcctgcacattttgttccagaaatcatcacacttctgcaacagggagatggaaat
gcctatagtaagaagaatactgaactgcgtcgccgtgagctcctggaagccatttcctca
cctttgctagaatatttgcaagagcatacccaggaagtagtgatagacaaggctactttt
gtcttggttgctgatattttaagaacagctcttggtgacatccagcctgcactagatgca
attgctaagttagcagcagaagagctggttccagggggccgtgatggacagctccacatt
gcagaacatcctgcaggccatctagttttgaaatggttaatagagcaggatgagaaaatg
agagagaatggaaaagaagtttgctttgggagaacgctggtggagcatgttggtatggag
aatctgaagacctgggcagaagtaaatcgaggtgccattattctgtgttgccttctccga
agcactgatgaaacggtggcaagcacagtcaaaaaaggactaaaaaagctcatcccgaag
ctgaagcagaataaaaatgtaaaaggaatagaagcattactggagaaattgacttcctag
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