Hirundo rustica (Barn swallow): 120765499
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Entry
120765499 CDS
T09369
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120765499 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120765499 (EXOSC5)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120765499 (EXOSC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120765499
NCBI-ProteinID:
XP_039946352
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All DBs
Position
Z:82197669..82199752
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AA seq
219 aa
AA seq
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MAVELESGQCRLRPFSCELGLLSRPDGSATFLQGDTSVLAGLYGPAEAKISKELPDRAAL
EVLLRPKVGLPGVLERSREQLLRQTCEAVVLGVLHPRTAISLVLQVLSDAGSLLSCCLNA
ACMALLDAGLPLATLFCGVTCALQPDGSILLDPTAQQEQEARAILTFAIASSERKVLMAN
TKGSCSVEEMQQCLAAAQRAASTIFQFYRDSVHRRYSKS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagttggagagcgggcagtgccggctgcggcccttctcctgcgagctgggg
ctgctgtcgcggcccgacggctcggccaccttcctgcagggtgacacctcagtgctggcc
gggttgtacggccctgcggaggccaagatcagcaaggagctgccagaccgggcagcgctg
gaggtgctgctgcgccccaaggtggggctgccaggtgtgctggagcgcagccgggagcag
ctgctgcgccaaacatgcgaggctgtggtcctgggggtgctgcacccccgcaccgccatc
tccctggtgctgcaggtcctgagtgacgctggctctctgctgtcatgctgcctgaatgct
gcctgcatggcgctgctggatgcggggctgcccctcgccaccctcttctgtggtgtcacc
tgcgcactgcagcccgacggcagcatcctgctggaccccacggcccaacaggagcaggag
gcccgtgccatcctcacctttgccatcgccagcagcgagaggaaggtgctgatggccaac
accaagggcagctgctctgtggaggagatgcagcagtgcctggccgcagcgcagcgtgcc
gccagcaccatcttccagttctaccgcgactccgtgcaccgccgctactccaagtcctga
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