Hirundo rustica (Barn swallow): 120765503
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Entry
120765503 CDS
T09369
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120765503 (RNF38)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120765503 (RNF38)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120765503 (RNF38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf_RING_Vps8_fungal
zf-C3H2C3
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
120765503
NCBI-ProteinID:
XP_039946355
LinkDB
All DBs
Position
Z:71578214..71630633
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AA seq
432 aa
AA seq
DB search
MRPWEMTSNRQPPLARPNQHHFSGERCSTPARNRRSPPVRRQRTRRDRLSRHNSISQDEN
YHHLSYGQQQAIEEPRAFRPPNVSPRMLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVT
TVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF
PPLISSDPFLLHPPHISTHHPPHLPPPGQFVPFQAQQSRSPLQRIENDVELLGEHLPVGG
FTYSPSAHPPTLPPSGPLQFLAHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPHP
YHPSLLPYVLSMLPVPPAVGPAFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI
EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC
RADASEVHRDSE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccatgggagatgacgtcaaataggcagcctcctttggctcgacccaaccaacac
cacttctcaggggaacgatgcagcacacctgcacgaaacaggaggagtcctcctgttcga
cgtcagagaacaaggagagatcgtttgtctagacataattctattagccaggatgaaaac
tatcaccatctctcctatggacagcagcaagcaatagaagagcctcgagccttccgccca
ccgaatgtatctcctcgtatgttgcacccagctgctcacccaccacagcagaatgcagtg
atggttgacattcatgatcagctccatcagggcacagttcctgtttcatacacagtgaca
actgtggctccgcatgggataccactttgcacaggccagcacattccagcctgcagcacg
cagcaggttccagggtgctcagtggttttcagtggccagcatcttccagtttgcagtgtg
cctcccccaatgcttcaggcgtgctcagtccagcacttacctgtaccatatgcagcattt
ccgcccctcatttctagtgacccattcctcttgcatcctcctcatatctctacacaccac
cctcctcacttacctcctccaggacaatttgttcctttccaagcacagcagtcacgatcg
ccacttcaaaggatagaaaatgacgtagaattgcttggagaacatcttcctgtaggaggt
tttacatactctccctcagcccatccaccaacgttgcctccctcaggtcctcttcaattc
ttagcccatgatccattacaccaggaggtgtcatttggggtaccttacccaccttttatg
cctcgaagactgacagggcgcagcagataccgatcacagcagccaataccaccacaccct
taccatcccagcctattaccttatgtgctatcaatgctcccagtgccaccggcagttgga
ccagctttcagctttgagttggatgtggaagatggagaggtagaaaactatgaggcactg
ctgaatttggcagaacgtctgggagaagccaaaccacggggattaacaaaagcagatatt
gagcagcttccatcctacaggttcaatccaaacaatcaccagtcagagcagacattatgt
gtggtgtgcatgtgtgattttgagtcaaggcagctacttagagtcttaccctgtaaccac
gaattccatgccaagtgtgttgataaatggctgaaggcaaatcgtacctgcccgatttgt
agagctgatgcttcagaagtgcatcgtgattcagaatga
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integrated database retrieval system
