Hirundo rustica (Barn swallow): 120765519
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Entry
120765519 CDS
T09369
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120765519 (SMC5)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
120765519 (SMC5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
HAAS
AAA_29
AAA_25
Motif
Other DBs
NCBI-GeneID:
120765519
NCBI-ProteinID:
XP_039946390
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All DBs
Position
Z:complement(57925017..57969023)
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AA seq
1061 aa
AA seq
DB search
MAAAREKGKAVGKVVKHGESKSPFVVGSIVRIFMENFLTYTVCEVHPGPNLNVVLGANGT
GKSSIVCAICLGLAGKPSFLGRADKISLFVKQGCMKGIVEIELFNSPDNIIITREIYVVS
NASVWFINRKPATLKTVEEQIAALNIQVDNLCQFLPQDKVGEFTKLSKTELLEATEKSIG
SPEMYQFHCELKNFREKERELENLCREKTTSLEKMKQRVERYKQDVERYHECKRHVDLIE
MLERKRPWVEYENVREQHEEVKQNRNQVKKELKCLKEMQSPWTKNIQEAEENLNNLDMKT
RDNTAEIRNISQKCKEKQDALEMKEKQIEEINQAFRMKKDEETNRQKKIYQTQRIIEEWQ
NELDTMAVCENLQPQIDAVNTELKKLQEEKANIDNDVSDLIAEKNNQEQEEKRIIGRLGQ
LNNIMHMKEENLKMRFRDTHSALMWLRNNKDKFKKNTCEPMMLEINVKDSRHAKYIENHI
SANDMRAFVFECQEDMETFLVEVRDHQKLRVNAVCAPAESCAESLPSRPIGELRRYGFFS
YLRELFDAPAPVMSYLCYQYRVHDVPVGTEKTRDMIERVIQETNLRQMYTAEERYIIKVS
SYTKQNLSSNTCLREAQYLTSSVDMDERGQLENQGQDISNTLKSLDARLTALFERQKLLE
HKDNKLRQEKKELLERGNRRRQLESKIGVKYDSLRQLEQDAIDLEKEFQLANAKIKEINK
QKAELVTELMHLMKRIIPLNMVKVALALQMTKMTAEKNRLQSEYKAGTVQLRAAQQRFHE
LDNRKQLLYEKCIELMKQARYVCRLGPDQDFPEEFQVAFQTLPDTLEEIDAFLNEEKTRA
SCFTGLSASVVEEYNKQTQEIQQLTEYLEEKKIELNNYKQNISQVKEKWLNLLKVMIEQI
NGKFSRFFSSMQCVGEVDLHMENEEEYEKYGIRIRVKFHSSTELHELSPYHHSGGEKTVS
TMLYLMALQELNRCPFRVVDEINQGMDPMNERRVFEMVVETACQKRTSQYFFITPKLLQN
LSYHEKVTVLLVYNGTFMLETHKWNLKRIKRRHRRLTRMNE
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgcgggaaaaggggaaggctgttgggaaggttgtgaagcatggtgagtct
aagtccccattcgttgtgggctccatcgtcaggatcttcatggagaactttctaacatac
actgtctgtgaagtacatccagggcccaacctgaacgtggttctaggtgctaatggcaca
ggcaagtcaagcattgtttgcgccatctgcctgggactggctggaaaaccttctttccta
gggcgagctgataagatcagtctctttgtgaagcaggggtgcatgaaaggcatagtggaa
atcgaactgtttaattcaccagacaatattatcatcacacgtgagatttatgtggtgagc
aatgcatcagtgtggtttatcaacagaaaaccagcaaccctgaaaacagtagaagaacag
attgcagccttgaacatccaggtggacaatttgtgccagtttcttcctcaggacaaagtt
ggagaatttacaaaactgagtaagactgagttgctcgaagccactgaaaaatccattggt
tctccagaaatgtaccagtttcattgcgaactgaaaaacttcagagaaaaggaaagagaa
ctggagaatttgtgcagagaaaaaaccacctcattggagaaaatgaaacagagggttgaa
cggtacaagcaagatgttgaaagataccatgaatgcaagcgccatgtagacttaatagag
atgcttgagaggaaaaggccatgggtggaatatgaaaatgttcgtgaacagcatgaagaa
gtgaaacaaaaccgaaatcaagttaagaaagaactgaagtgtctgaaagaaatgcagtcc
ccatggacaaaaaatatccaagaagctgaagaaaatttaaacaatctggatatgaaaacc
agagataatactgctgaaatcagaaatatttcccaaaaatgtaaagagaaacaagatgct
ttggagatgaaagaaaaacagattgaagaaattaatcaagcattcagaatgaaaaaagat
gaagaaacaaacaggcagaagaagatataccaaactcaaagaataatagaggagtggcag
aatgagctggatacaatggcagtctgtgagaatcttcagccacaaattgatgctgttaat
actgagctgaaaaaactacaagaagaaaaggcaaatattgataatgatgtcagtgatcta
atagcagaaaaaaacaaccaagagcaggaagagaaaagaataattggtcgccttggacaa
cttaataatataatgcatatgaaggaagagaaccttaaaatgagattccgagacacacac
tctgctcttatgtggctaagaaacaacaaagacaagtttaaaaaaaacacttgtgaaccc
atgatgcttgaaatcaatgtgaaggacagtagacatgcaaaatacattgaaaatcacatt
tcggccaatgacatgagggctttcgtttttgagtgtcaagaagatatggaaacatttctg
gtggaggtgcgtgatcatcagaaactaagagtgaatgctgtctgtgcacctgctgaatca
tgtgctgaaagtttgccttcaagacctattggagaattacgccgatatggatttttttca
tatttacgagagttatttgatgctcctgctcctgtgatgagttacctttgttaccagtac
cgagttcatgatgttcctgtgggaacagagaagaccagagacatgattgaaagggtcata
caggaaaccaatctgaggcaaatgtatacagcagaagaaagatacattattaaagtatct
tcttacacaaaacaaaacctctctagtaacacgtgcttgagagaggcacagtatctcact
agttcagtggatatggatgaaagaggacagttggaaaaccaaggacaggacatcagtaat
acattaaagtcattggatgcacgtttgactgcactgtttgagagacagaaacttctggaa
cacaaggacaataagctcaggcaagagaagaaggagcttttagagcgaggaaaccggagg
aggcagttggaatcaaaaattggtgtgaagtatgatagtttaagacagctggaacaagat
gctattgacctagagaaggaatttcagctggcaaatgcaaagatcaaagaaataaataaa
cagaaagcagaacttgttactgaattaatgcatctcatgaagaggatcataccactgaac
atggtcaaagtagctttggctcttcagatgaccaaaatgactgctgagaagaacagacta
caatcagagtacaaagcaggaactgtacaactaagagctgcacagcaacgttttcatgaa
ctggataataggaagcaacttctttatgagaagtgtattgaattgatgaaacaagctcga
tacgtctgcagattgggtccggatcaagattttccagaagaatttcaagttgcttttcag
actcttccagacacattggaggaaattgatgcttttctgaatgaagagaaaaccagggct
tcctgtttcacaggcctcagtgcttcggttgttgaagaatacaataagcaaacacaggaa
atacagcagttgacagaatatctagaggaaaagaaaattgagttgaataactataagcaa
aacatttcacaggtgaaagaaaagtggctaaacctcttgaaagtaatgattgaacaaatt
aatggaaagttcagtaggttctttagttctatgcagtgtgtcggtgaagttgatcttcat
atggaaaatgaggaggagtatgagaagtatggaattcgcattagagtcaaattccacagc
agcactgagcttcatgagttgtctccatatcatcacagtggaggtgagaaaactgtttcc
actatgttatacctgatggctctgcaagaactcaacagatgtcctttcagggttgttgac
gaaataaatcagggaatggatccaatgaatgagagaagagtttttgaaatggttgtggaa
actgcttgtcaaaaaaggacatctcagtacttcttcattacaccaaagctcctccagaat
ctcagttaccatgagaaggtgactgtgctgcttgtctacaatggaacttttatgctggag
acacacaaatggaacttgaaacgcatcaagagacggcatcggcggcttacaaggatgaat
gaatag
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