Hirundo rustica (Barn swallow): 120765543
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Entry
120765543 CDS
T09369
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrt04515
]
120765543 (PCDH19)
Cell adhesion molecules [BR:
hrt04515
]
Cadherins
Protocadherins
120765543 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
120765543
NCBI-ProteinID:
XP_039946446
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All DBs
Position
Z:complement(89651355..89707763)
Genome browser
AA seq
1096 aa
AA seq
DB search
MGALPALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFR
VVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDL
NDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRG
DGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPA
YTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSG
AIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENA
PPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLT
IQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDL
GLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPS
LQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGR
LSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYL
SPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSY
GHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSE
STFLNVESQNNRNAGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHL
IKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEQ
EQSEGFHCREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCG
AKRTFATFGKEGGEPPAEERLANPKGKRTVDSAACSPKVSGAVREAGNGCEAVSPVTSPL
HLKSPLSGKPAAPYGAGHCAGSRDREPFGNSGPSRPTEAEPRGADSEGGGQEGNPLLQER
REKDSPGARRLKDIVL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgggggctctcccggcgctgctgggggccgccttgctgtgggccggcgccggcgccctc
gtcaacctcaagtattcggtggaagaggagcagcgggccggcacggtgatcgccaacgtc
gccaaggacgcccgggacgccggtttcgtgctggacccccggcagcccgccgccttccgg
gtggtctccaactcggccccccacttggtggacatcagcccggggtccgggctgctggtg
accaagcagaagatcgacagggacctgctatgccggcagagccccaagtgtgtcatctcg
ctggaggtgatgtccagctccatggagatctgcgtgatcaagctggagatcaaggaccta
aatgacaatgcacccagcttccccaccgaccaaatcgagctggagatctcagagacggcc
agccctggcactcgggtgccactggagagtgcctatgacccggactcgggcagctttggt
gtgcagagctatgagatcacccccaatgacctctttgggctggagaccaagacacggggt
gacgggtcccgttttgccgagctggtggtggagaagagcctggaccgtgagacccagtcc
cactacagctacgtgatcacggcgctggatggtggtgacccgcccaactttggcacagtg
gagctcagcatccgcgtcatcgactccaacgacaacaacccgctctttgaggagccagcc
tacactgtcagcgtgcctgaaaatgccccgccggggacgccagtcatccgcctcaatgcc
tctgacccggacgagggcaccaacggccaggtcctctactccttccacagctacgtctct
gagcgggcccgagagctcttccaaattgacccccagagtggcctcatcacggtgagcggt
gccatcgactatgaggagggtcacgtctatgagctggacgtgcaggccaaggacttgggg
cctaactccatccctgcccattgcaaagtgaccattagtgtccaggacgccaacgacaac
ccgcccctcatcaacctgctctctgtcaacagcgagctggtggaggtgagcgagaacgcc
ccgccggggtacgtcatcgccctggtgcgggtctcagatcgcgactccggggccaacggg
cgggtgcagtgcaagctcctgggcaacgtgcctttccgactccaggagtatgagagcttc
tccaccatcctggtggacgggcggctggaccgggagcagagggaccagtacaacctcacc
atccaggctagggataatggaatcccttccctgcaggccaccaagtccttcaccgtcaag
atcaccgatgagaatgacaaccacccccacttctccaagccctattaccaagtcatcgtg
caggagaataacaccccaggggcctacctcctctcggtctcggccagagaccctgacctg
ggcctcaatggcagcgtgtcctaccagatcgtgccctcccaagtcagggacatgcctgtt
ttcacctatgtctccatcaaccccaactctggagatatctatgctttgaggtccttcaat
catgaacagaccaaggcctttgagttcaaggtcttggcaaaagatgggggtaatccctct
ctgcagagcaatgccactgtcagggtgatcgtcctggatgtcaacgacaacacgcccgtg
atcacggccccgccgctggtcaatgggacggcggaggtgtacatccccaggaacgcgggc
gttggctacttggtcacggtggtcaaggcagatgactatgatgagggtgaaaatggcaga
ctttcctatgaaatggtggaaggagacagaggattttttgagatcgaccaggtcaatgga
gagataaggaccaccagagcctttggggagaatgccaaaacagcctatgagctcattgtg
gtggctcacgaccatgggaaaacatccctctcggcttctgccttgattttgatatacctg
tctccggccctggatgcccaggagtccataggatctgttaacctctccttgattttcatt
atcgccctggggtctattgcagccattctttttgtcaccatgatctttgtggcagtcaag
tgcaaaagggataacaaggaaatcaggacctacaactgcagaatcgcggagtactcctac
gggcaccagaagaaatcaagcaagaagaagaaaatcagcaagaacgacatccgcctggta
ccgcgggacgtggaggagacggataaaatgaacgttgtgagctgctcctctctcacctcc
tccctcaactacttcgactaccaccagcagaccctgccgctgggctgccgccgctccgag
agcaccttcctcaacgtggagagccagaacaacaggaacgccggctccaaccacatctac
caccacaccttcacggggcagagcccccagcagcccgacctcatcatcaacgggatgccg
ctgccggagactgaaaactactcctttgactccaactacgtgaacagcagagctcattta
ataaaaagcagctccacgttcaaggacttggaggggaacagcctgaaggacagcggccat
gaggagagcgaccagacggacagcgagcatgacgtgcagcgaggcctctactgcgacacg
gccgtcaacgatgtgctgaacaccagcgtcccctccatggggtcccagggccccgagcaa
gagcagagcgaggggttccactgccgggaggagtgccgcatcctgggccactcggacagg
tgctggatgccccgtggcgccgtgcccagccgcgccaagtcccccgagcacggcaggaac
gtcatcgccctgtccatcgaggccacggcggtggacgcggagccttacgcggactgcggc
gcaaaaaggaccttcgccaccttcggcaaggagggcggcgagcccccggccgaggagcgg
ctcgccaaccccaaaggcaaaagaacggtggactcggccgcctgcagccccaaggtgagc
ggcgccgtccgtgaggccggcaacggctgcgaggccgtcagccccgtcacctcgcccctg
cacctgaagagccccttgtccggcaagccggcggcgccctacggtgccgggcactgcgcc
ggcagccgggaccgggagccctttgggaacagtggcccttcccggcccacggaggcagag
ccccggggggcggacagcgagggcggcgggcaagagggcaacccgctcctgcaggaacgc
cgggaaaaagactcgcccggcgcccggcgactaaaggacatcgtcctctga
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