Hirundo rustica (Barn swallow): 120765575
Help
Entry
120765575 CDS
T09369
Symbol
ZBED1
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120765575 (ZBED1)
04121 Ubiquitin system [BR:
hrt04121
]
120765575 (ZBED1)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120765575 (ZBED1)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120765575 (ZBED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
hAT-like_RNase-H
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
120765575
NCBI-ProteinID:
XP_039946515
LinkDB
All DBs
Position
2:83622001..83674431
Genome browser
AA seq
695 aa
AA seq
DB search
MENKSLEGSPSDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKIKPESSQQVVQDSLIMKTYQNYEN
KKHQELTSAVISLICEGMYPASIVDEPTFKALLRTADPRYELPSRKYFCTKAIPEKYSAI
REIVLKELTEVLWCGISTDMWRSENQNRSYVTVAVHFLSSSPANCLAVNSRCLKTFEVPE
DNTAETITRVLYETFIEWGINTKVFGATTDYSKDIVKACSLLDIPVQMPCLGHTFNAGIQ
QAFQLPKLCNLLARCRKLVEYFQQSTVAMYMLSEKQKQQNILHCMLVSDRVSWWGSTLAM
LQRLKEQQFVIAAVLVEDSNNHHLMLESSEWNTIEGLVELLQPFKQVAEMMSASKYPTIS
MVKPLLHMLLNTTLNIKENDLKEISMAKEVIAKELSTTYQHTPEIDMFLNVATFLDPRYK
KLPFLSAFERQQVENRVVEEAKSLLEKVKENSFRTEEKFFTVSEEPPMKKIIISSTPPPT
SVINNMLAEIFCQTGGVEDQEEWHAQIVEELSNFKSQKVLGLNEDPLKWWSDRLALFPVL
PKVLQKYWCILATRVFPERLFGSSANVVSAKRNRLAPAHVDEQIFLYENSRNGSEAEPED
EDEGEWGLEQEQIFNLNDSVNINNNFFNIRDSGFV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaaagtttagaaggttccccatcagacctaaagttagtggctcacccgaga
gcaaagagtaaagtgtggaagtactttgggtttgataccaatgcggaaggatgcatatta
cagtggaagaagatctactgccgtatttgcatggcacagattgcctattcaggaaacacg
tccaacctttcctaccaccttgagaaaaatcatcccgatgagttctgcgagtttgtgaaa
agtaacactgagcaaatgagagaagcctttgccacagcattttcaaaaatcaagccggaa
tcatcgcagcaggttgttcaagatagcctcatcatgaagacctaccagaactacgaaaac
aaaaaacatcaggaactgacatctgcagtcatcagcttaatttgcgagggcatgtatcca
gcctccattgttgatgaacctaccttcaaggccctcttgagaacagcggaccccaggtat
gaacttccgagccggaagtacttctgtacaaaagcaattcctgaaaagtacagtgctatt
agagaaattgtgctgaaagagctcaccgaggttctgtggtgtggcatatccacagacatg
tggaggagcgaaaaccagaaccggtcatatgtaactgtggcagttcattttctcagcagc
agtcctgccaactgcctggctgtgaactctcggtgtttgaaaacgttcgaagtaccggag
gataacactgcagagaccattacacgagtcctttatgaaacattcattgagtgggggatc
aatacaaaagtctttggtgctacaacagattacagtaaagacattgtaaaagcttgctct
ctcctagatattcccgtacagatgccttgtttgggccatacttttaacgcaggaatacaa
caagcttttcagctccccaaactctgcaacctccttgccaggtgccgaaagctggtggag
tattttcagcagtctacggtcgcaatgtacatgctgagtgaaaagcagaagcagcagaat
attctccactgcatgctggtaagcgaccgtgtttcctggtggggaagcacgctcgcgatg
ctgcagcgcctcaaggagcagcagtttgtcattgcggctgttctcgtggaggacagcaac
aaccaccacctcatgctggaatccagtgagtggaatacaatcgaagggctggtggagctg
ctccagcctttcaagcaggttgcagagatgatgtctgcttcaaagtacccgacaataagt
atggtgaagcctcttctccacatgcttctgaatactactctgaacatcaaagagaatgat
ttgaaagaaatcagcatggcaaaggaggtgattgctaaagagttgtcaaccacctaccag
cacacacctgagatagacatgtttctcaatgttgcaactttcttggatccccgttacaag
aaactgccttttctttcagcctttgagaggcagcaggtagaaaacagagtggtggaagaa
gcaaaaagcctgctggagaaagtaaaagaaaatagctttagaactgaggagaaattcttc
actgtttcagaagaaccccctatgaaaaaaattatcatctcctctactcctcctcctacc
agtgtcatcaacaacatgctcgcagagatcttctgccagacaggaggcgtggaagaccag
gaggaatggcatgctcaaattgttgaggagttgagcaacttcaagtcacaaaaggtcctc
ggtttgaatgaggacccattgaagtggtggtctgacagactagcgctgtttccagtttta
ccaaaggttcttcaaaaatactggtgtattctggccacaagggtcttccctgaacgcctt
tttggttcttctgctaatgttgtgagtgcaaagagaaaccggttagccccggctcacgtg
gatgagcagatctttttgtatgaaaatagtcgcaatgggtctgaggcagaaccggaggac
gaagatgaaggagagtggggtttggaacaggaacagatttttaacttaaatgactcggta
aacataaacaacaatttctttaatattcgagacagtgggtttgtttaa
DBGET
integrated database retrieval system
