Hirundo rustica (Barn swallow): 120765640
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Entry
120765640 CDS
T09369
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120765640 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120765640 (MYO5B)
04131 Membrane trafficking [BR:
hrt04131
]
120765640 (MYO5B)
03029 Mitochondrial biogenesis [BR:
hrt03029
]
120765640 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hrt04812
]
120765640 (MYO5B)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120765640 (MYO5B)
mRNA cycle factors
P-body specific factors
120765640 (MYO5B)
Membrane trafficking [BR:
hrt04131
]
Others
Actin-binding proteins
Myosins
120765640 (MYO5B)
Mitochondrial biogenesis [BR:
hrt03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120765640 (MYO5B)
Cytoskeleton proteins [BR:
hrt04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120765640 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
nSTAND3
Myosin_N
5_3_exonuc
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
120765640
NCBI-ProteinID:
XP_039946628
LinkDB
All DBs
Position
Z:641591..794739
Genome browser
AA seq
1847 aa
AA seq
DB search
MSATQLYTKHTRVWIPDPDEVWRSAEIIKDYKEGDKSLQLKLEDETLYEYPIDLQGNELP
FLRNPDILEGQNDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYE
QDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSTSETNIEAKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKKYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASSSLPEFKDLGLTCAEDFFYTSQGGETSINGMD
DADDFEKTRHAFTLLGVKESHQMTIFRIIAAILHLGNLDIQGERDREACSVSSEDEHLSN
FCSLLGVEHSQMQHWLCHRKLVTTAETYVKSMSLHQVVNARNALAKHIYAQLFKWIVQHI
NKALHTTVKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EGIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPQGTDQNWAQKLYDRHAASQHFQK
PRISNTSFIVLHFADKVEYQSEGFLEKNRDTVYEEQINILKASKYQMVADLFQEEKDAVP
ATAMKKGAPRISVRSARAVFKAANKEHRKTVGHQFRNSLHLLMETLNATTPHYVRCIKPN
DEKLPFKFDPERAVQQLRACGVLETIRISAAGFPSRWSYPDFLNRYRVLMNKRHLSNKDK
EQICQSLLKDLIEDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRVATIMIQKTVRGWLQR
AKYQRLRQATLTLQRYVRGHLARRLFEHLRRTRAAIILQKQYRMLRMRRAFLRVRNATLT
IQAFTRGMFVRRIYYQMLAEHKATVLQRYARGWLARLRFRRARAAAVVLQCHWRRLRARR
QLQALRIEARSVQHLKKLNVGMENKVVQLQRKVDEQNKENKLLNEQLSMLTSAHSSEVEK
LKKELQQYQQSQRGDGNQLLSLQEEMERLRLELERAHRQREAMEDSHGKERDLLRKRISD
LEEENALLKQEKEELNSRILCQSEDEFAQNTVEENIQMKKELEEERSRYQNLVKEYASLE
QKYDNLKDEITIFKQTSGHRRNPSNQSSLESDSNNPSICTSEIGDTEDVIQQVEEIGMEK
AAMDMTLFLKLQKRVRELELERKKLQAQLEKKEQEIKQSQVIETKTEVTSEYEDFAYNSL
KRQELESENKKLKNELNELRKAIADHAVQNNYSNDVQDSYNLLLNQLKSANEELEVRKEE
VLTLRSQIMKAAQQKDTKKNMESISPSASWPNSDRHVDQADAIEAYQGMCETNRKTEDWG
YLNEDGELGLAYQGLKQVARLLEAQLQDQRREHEEEMEAMRNQIDLMQEELENQQQAFLQ
TLQLSPEVQVELGLQQEITRLTNENLDLKELLEKLEKNEKKLKKQLKIYMKKVQDFEASE
TTVPVERRPHGRNMQVAVQRKEKDFQGMLEYYKEDEPLLIRNLITDLKPQAVSATVPCLP
AYILYMCIRHADYINDDQKVHSLLTSTINGVKKVLKKHQDDFEMTSFWLANTCRLLHCLK
QYSGEEVFMTQNTAKQNEHCLKNFDLTEYRQVLGQLSIQIYQQLINISEGILQPMIVSAV
LENESIQGLSSVKPMGHRKYSSNAAEGDSSYSLDEMIRQLNTFHSIMCDQGLDPEIIQQV
FKQLFYMINAIALNNLLLRKDVCSWSTGMQLRFNISQLEEWLRGKNLQQSGAAQTLEPLI
QAAQLLQLKKKTSEDAEAICSLCTSLTTQQIVKILNLYTPVNEFEERVTVAFIRNIQKQL
QERNDPPQLLLDFKHMFPVLFPFNPSAITMDSIHLPASLNLDFLNKV
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccacgcagctctacaccaagcacactagggtttggattcctgaccccgatgaa
gtttggagatcagcagaaatcatcaaggattacaaagagggagataaaagcctccagctg
aaacttgaagatgaaactctctacgaatatcccatcgacctccaagggaatgagctgccc
ttcctgcgcaatccagacatcctggaagggcagaacgacctgacagccctgagctacctg
catgagcccgccgtcctgcacaacctcaaagtcaggttcctcgagtccaaccacatctat
acctactgtggtatcgtgctggtggccatcaacccctacgagcagctgccaatctacgag
caggatgtcatctacgcctacagcggccagaacatgggggacatggacccccacatcttc
gccgtggctgaggaagcctacaagcagatggccagggatgagaagaaccagtccatcatc
gtgagtggggagtcgggagcaggcaagacggtctcggccaaatacgccatgcgcttcttt
gccactgttgggggctccaccagcgagaccaacattgaagccaaagtcctggcctccagc
cccatcatggaggccatcggaaatgctaaaacaacaaggaatgacaacagcagccgcttt
gggaaatacattcagattggctttgataaaaaataccacatcattggtgccaacatgagg
acgtatctgctggaaaaatctcgggttgtatttcaggcagaggatgagcgcaactaccac
atcttctatcagctctgtgcctcctcaagcctcccagaattcaaagaccttggactcacc
tgtgctgaagactttttctacacttctcagggaggtgaaacatccatcaacggcatggac
gatgctgatgactttgagaaaaccaggcatgccttcaccctgctcggagtgaaggagtct
catcagatgaccatttttaggataattgctgccattctgcacctggggaacttggacatc
caaggggagcgagacagggaagcctgcagtgtgtcgagcgaggacgagcacctgagcaac
ttctgcagcctgctgggcgtggagcacagccagatgcagcactggctgtgccaccgcaag
ctcgtcaccacggccgagacctacgtgaagagcatgtccctgcaccaggtggtgaacgcc
aggaacgccctggccaagcacatctatgcccagctcttcaagtggatcgtgcagcacatc
aacaaggccctgcacaccacggtgaagcagcactccttcatcggcgtgctcgacatctac
gggtttgaaacttttgaagtgaatagctttgaacagttctgtatcaactatgccaacgaa
aagcttcagcagcagttcaactcgcacgtgtttaagctggaacaagaagagtacatgaag
gagggaatcccttggactctcatagacttctatgacaaccagccctgcatagacctgata
gaggccaagcttgggatcctggacctgctggatgaagagtgcaaggtgccccagggcaca
gaccagaactgggcgcagaagctgtacgaccgccacgccgccagccaacacttccagaag
cctcgcatatccaacacctccttcatcgtcctgcacttcgctgacaaggtggagtaccag
agcgaggggtttctggagaagaacagggacaccgtgtatgaggagcagatcaacatcctg
aaagccagcaagtatcagatggtagcagacttattccaggaagagaaggacgctgtgccc
gccactgccatgaaaaagggagcgccccggatcagcgtccgctctgccagggcagtcttc
aaagctgccaacaaggagcacaggaaaaccgtgggacaccagttccgcaactccctgcac
ctgctgatggagaccctgaacgccaccaccccgcactacgtgcgctgcatcaagcccaac
gacgagaagctccccttcaagtttgatccggagagagcagtgcagcagctgagagcctgt
ggagtgctggagaccatccggatcagtgcagctggcttcccatccaggtggtcctaccct
gactttttaaataggtaccgtgtgcttatgaacaagagacacctctccaacaaagacaag
gagcagatctgtcagagcctgttgaaggacctcattgaggatccagacaagttccagttt
ggccgtaccaagatctttttccgtgcaggccaggtggcatatctggagaagctgcgggca
gacaagttcagagttgccaccatcatgatccagaagacggtgcggggctggctgcagagg
gccaagtaccagaggctgagacaagccaccctcaccctgcagcgctacgtccgcgggcac
ctggcacgcaggctttttgagcacctgaggaggacgagggctgccatcatcttgcagaag
cagtaccgaatgctgcggatgcgccgggctttcctgagggtccgaaacgccaccctcacc
atccaggctttcactcggggcatgtttgtcaggaggatttactaccagatgctggcggag
cacaaggccaccgtcctgcagaggtacgcccggggctggctggcccgcctgcggttccgc
cgcgcccgggccgccgccgtggtgctgcagtgccactggcggcgcctccgggcccggcgc
cagctccaggccctccgcatcgaggcacgctcggtacagcacctcaagaagctcaacgtc
ggcatggagaacaaggtggtgcagctgcagaggaaggtggacgagcagaacaaggagaac
aagcttctgaatgagcagctatccatgctgacatcagcccactcctccgaggtggagaag
ctgaagaaggagctgcagcagtaccagcagagccagcggggtgatggcaaccagctcctc
agcctgcaggaggagatggagcggctgcggctggagctggagagggctcacaggcagagg
gaggccatggaggacagccatggcaaggagagggacctgctgaggaagcgtatctctgac
ctggaagaagaaaacgctctcctgaagcaggaaaaagaggagctgaacagcaggattctc
tgtcagtctgaagatgaatttgcacaaaacacagttgaggaaaatatccagatgaagaaa
gagctcgaagaagagagatctcgttatcagaacctggtaaaagagtatgcaagtctggag
cagaaatatgacaacttgaaggatgaaattactatttttaagcaaacatcggggcacagg
agaaacccatccaaccagagcagcttggagtctgattccaataacccatccatctgcacc
tctgagatcggggacaccgaggatgtgatacagcaggtggaggagattgggatggagaaa
gcagccatggacatgaccctcttcctaaagctgcagaagcgagtgagggagctcgagctg
gagaggaagaagctgcaagcccagttggagaaaaaggagcaagagatcaagcaatcccag
gtaattgaaacaaagactgaagtgacttcggaatatgaagattttgcatacaacagcctg
aagaggcaagagctggagtcggagaacaagaagctgaaaaatgagctcaatgagctgagg
aaggccatcgcagaccacgccgtgcagaacaactactccaatgatgtgcaggacagctac
aacctcctcctgaaccagctgaaatcggccaacgaggagctggaggtgcgcaaggaggag
gtgctcaccctcaggtcgcagatcatgaaggcagcccagcagaaggacacaaagaaaaac
atggagagcatctcccccagtgccagctggcccaacagtgaccggcacgttgaccaggcg
gacgcgatcgaagcctaccagggaatgtgcgagaccaaccgcaagactgaggactggggg
tatctcaatgaagatggagagctcggcttggcttatcaaggtttaaagcaagttgccagg
ttgctggaagcacagctccaggaccagagaagggagcatgaagaagagatggaagcgatg
aggaaccagattgatttaatgcaagaggagctggagaaccagcagcaggcattcctgcag
actctgcagctctctccagaggtccaggtggagttaggacttcagcaagaaattacacgt
ctgaccaatgaaaacctggatcttaaggaattgctggaaaagttggaaaagaatgaaaag
aagctgaagaagcagctgaagatttacatgaagaaggtccaagattttgaagcatcggag
acaacggtgccagtggagaggaggccacacgggcggaacatgcaggttgctgtccagagg
aaggagaaggattttcagggcatgctggaatattacaaagaagatgagccactcctcatc
cgaaacctcattacagatctcaagccccaggcagtgtctgctactgttccctgccttcct
gcttacatcctctacatgtgtatcagacacgcagattacatcaatgatgaccagaaggtg
cactccttgctcacctccaccatcaacggtgttaagaaagtgctgaagaaacaccaagac
gactttgagatgacatcgttctggctggccaacacctgccgcctcctgcactgcctgaag
cagtacagcggggaagaggttttcatgacccaaaacacggcgaagcagaacgagcactgc
ctgaagaacttcgacctgaccgagtaccgccaggtgctgggccagctctccatccagatc
taccagcagctcatcaacatttcagagggcatcctgcagcccatgatcgtgtctgctgtg
ttggaaaacgagagtatccaagggctttccagtgtcaaaccgatgggccacaggaaatac
tcctccaacgcggcggaaggtgacagctcctacagcctggatgaaatgattcgccagctg
aacacattccacagcatcatgtgtgaccagggcctggacccagagatcatccagcaggtg
ttcaagcagctcttctacatgatcaatgccatcgccctgaacaacctcctgctgaggaag
gatgtctgctcgtggagcacgggcatgcagctgaggtttaacataagccagctggaggaa
tggctgcgtgggaagaatctgcagcagagtggagcagcacaaactctggagcccttgatt
caggcagcacagcttctgcagctgaaaaagaaaacctcagaggatgccgaggccatctgc
tccttgtgcacgtcgctcacgacgcagcagattgtaaagatacttaatctctacactcct
gtgaatgagtttgaagaacgtgtgacagtagctttcatacgaaacatacagaagcagttg
caagaacggaatgaccctccacagctgctgttagacttcaagcacatgttccctgttctg
ttcccgttcaacccatctgccatcaccatggactccattcatctccctgcttctctcaac
ttggattttctcaataaagtctga
DBGET
integrated database retrieval system
