Hirundo rustica (Barn swallow): 120765670
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Entry
120765670 CDS
T09369
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase KCMF1-like
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120765670
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120765670
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120765670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
TagA
zf-C2H2
Dicty_REP
DUF6244
Zn_SUZ12
zf-C2H2_jaz
TFIIA
Di19_C
Motif
Other DBs
NCBI-GeneID:
120765670
NCBI-ProteinID:
XP_039946692
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Position
Z:complement(73469157..73512995)
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AA seq
556 aa
AA seq
DB search
MCVLRVRPLLGSVTSAASLPRAEPALARQPARESRRPAGEFPLPPAARPGREEEGEGAVP
GAGKAPARPPPSLVRQGRSGAGGGASGRRGPESPCHGAREAVAAGSAPRRASEKAGGGGG
GRPALRRLLCFRPLSGPAPAPLLSHRGGGGGRGRSGARAARGSPGTGLGRRLXTRMSRHE
GVSCDACLKGNFRGRRYKCLICYDYDLCATCYESGATTTRHTTDHPMQCILTRVDFDLYY
GGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVT
DDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNMHFTTSSPGGLSSSQ
SSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLERQHAQAAR
QQLETARNATRRTNTINVNTTMTQSTTTTSTSNTENSQQTIQNSQFLLTRLNDPKMSEAE
RQSMESERADCSLFVQELLLSTLMQEESSSSDEDERGEIADFGAMGCVDIMPLDVALENL
NLKESNKGNEPPPPPL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtccttcgggtcaggccgctgctgggttctgttacctcggccgcttccttgcct
cgggcggagcccgccctggcccggcagcccgcgcgggagagccgccgccctgccggggag
tttcctcttcctccggcagcgcggccggggcgggaggaggaaggggaaggcgcagtaccc
ggggccgggaaggctccagcgcggccgccgccgtcgctggtgcggcaggggcggagcggc
gcgggaggcggcgccagcggccggcggggcccggagtcaccgtgtcacggcgcccgggaa
gccgttgccgccggatccgccccccgtagggcgagcgagaaggcaggaggaggaggagga
gggaggccggctcttcgccgcctcttgtgttttcgccccctttccggcccagccccggcc
cctctcctctcacaccggggcggcggcgggggccgaggccgcagcggcgcccgagctgcc
cgcgggagccccgggacgggcctgggccgccgtctctgaactaggatgtcccgacatgaa
ggtgtcagctgtgatgcatgtttaaaaggaaattttcgtggtcgccggtacaagtgttta
atttgctacgattacgatctgtgtgcaacttgttatgaaagtggtgcaacgacaacaagg
catacaactgaccatccaatgcagtgcatactaacaagagtagattttgacttgtactat
ggtggtgaagccttctctgtagagcagccacagtcttttacttgtccttattgtgggaaa
atgggttatacggaaacatctcttcaagaacatgttacttctgagcatgcagaaacatca
acagaagtgatttgtccaatatgtgcagcattacctggaggggatccgaatcacgtaaca
gatgactttgcagctcatcttacactggaacacagagctcctagagatttagatgaatcc
agtggcgttcggcatgtacgtaggatgttccacccaggccggggtttgggaggcccccgt
gctcgtagatcaaacatgcactttactaccagttctcctggtgggctttcgtcttctcag
agttcgtattctccaagcaatagagaagccatggatcctatagctgagcttttatcccag
ctatcgggcgtgaggcgttctgcaggaggacagctcaactcctctggtccttctgcttct
cagttacagcagctgcagatgcaactgcagttggaacggcaacatgcacaggcagcaaga
cagcaactggagactgcacgcaatgcaaccagacgcaccaacacgatcaatgtcaacacc
actatgacacaatctaccacaacaactagcacatctaacacagaaaacagtcagcagact
atccagaattcccagttccttctgacaaggttgaatgatccgaagatgtcagaagcagag
cgtcagtcaatggagagtgaacgggcagactgcagcctgtttgttcaggagcttctactg
tccaccttgatgcaggaagaaagttcctcctcagacgaggatgagcggggggagattgca
gattttggtgctatgggctgtgtagatattatgcctctagatgttgctttagaaaaccta
aatttaaaagagagtaataaaggaaatgagcctcctccacctcctctttga
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