Hirundo rustica (Barn swallow): 120765713
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Entry
120765713 CDS
T09369
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hrt00535
]
120765713
04091 Lectins [BR:
hrt04091
]
120765713
Proteoglycans [BR:
hrt00535
]
Cell surface proteoglycans
Others
120765713
Lectins [BR:
hrt04091
]
C-Type lectins
Others
120765713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
TMEM154
TMEM52
YqbF
Motif
Other DBs
NCBI-GeneID:
120765713
NCBI-ProteinID:
XP_039946794
LinkDB
All DBs
Position
Z:13078370..13115205
Genome browser
AA seq
2357 aa
AA seq
DB search
MAEASSQTFLQLQFRTSKPQGLLLLAAGKSDYCLMELRSGYVQLRINFGGGERVLHSQQR
SQLNDLAWHLVELCHEQDNVTLVIDKRDRTTAKMPGILYELNIDYGFYIGGTGKLDVPYL
VGALPRFRGCIDGVSFNQLDILMPLRPFPGFKNIHDVSVGCSDEFFAGEEEPISFFSSRS
YISFPTWNVDNEGVFEYTLQTSAACGLLLFHPGQAGDFIAMEMEDGLIKAYIGKHKSRTH
LSSRRSVSDSHWHYIKLKFTAEYLQLTLDEETVKKSLPPKSKLPLLKGSFFVGGVDDSIR
SEVIKLISVSGKYARGGSFKGCLRNLKANSEKKSLKNVLVTKDISAGCEMQSSSKTNLSL
EMTVKNPPVKAAPVFAISHENSISLGKEDKSHLLVLSNLIVLEGKQASLESKHIKVNLDF
QKLGINQSQILFDIKEPPSHGHLKLNVEPLQEVNTFTMQDVWQGKILYVHDGSEDTYDYF
NFSISISSEKIVSPYLEGNEQHMFSITVTPVNDAPEIILPEGNLLLLLENSKKRLTNDLI
KVLDKDTDSVGLRLSVLGNLNADAGYLENSRHPGKAITTFSNEDLNKGTVFFVHTGIKNS
RIVLRASDGEKMSNTVVLRVMAVPLDYRVVNNSGITLLQGVTALIRPRHLAVETNAVLQD
LEIRYKITEPPHFGEVQRQLSRGVWKQVSSFSQRSLQRSRVRYCSTFKDIQLENVMEQFK
FKVSIGNRTSEEYTFPIKVKWLRYSLLKHAPLEIEKSKKKYLNSGHLFAVIEDLEIPEDE
LHFKLLSIPRNGQLLLNDQPLKKDSVFSQKDITDQKVAYELIQYHKDYDSFRFFISTKYL
DSNFYEFEVYIKSDFRNIILTNNGLNVTEGEGELITSTKLFVQTPDNKTFQYEVIQFPKH
GKLKLTNFSGSFENSGNLTTFTNKHITDKCLMYVHDDSETMFDEFLVRAFSKESGKRTNF
DPEVEPLSLEIRFCISVQLKNDEKPVRVIDKIFDIVRNGQRLLTLADLCYHDPDSDFDDG
QLLYIRRGISNGDLVLTNDTLHRVYQFKQVDLAQKRVLFIHHGADFGRFVLFVTDGKHYT
SLLLEVNATNPYVRLANNTGLLVQKGKEETISTTNLSATTNQDIRNDHELTYEILSSPKC
GRIYVNNVLTDSFTQLDLIKGHVTYRHDDSNNLIDTLSFTIHAGDVHLDAGLQVRVYLES
HQQPPRIVNKSNLLVEEGKPVKISKGKLQVVHENSSPSEIVFTVRQLPVHGYIRRFSSEE
SYLSSDQRPALSFTQQDVNEGKVQYVQTVSDQLEDHFFLDVTNGVRTVSGIEISVDIIPR
MIPLEVQNFTVFEGGSKALVEDYLKISSRHFAGLSCEFILTEQPKHGYVENSRVPGIKLA
TFTRKQVEQELIYYVHDDSEELMDSFTVIVNNTELWKQSLPQTVFVTVTAVNDEAPVVKV
NRILQVWVGSVTEITIDDLCAEDKDSSPSELVYSITPPSNGHLALKSSPNKSILTFTQAH
IIKGQLIFVHNGAMSGGFNFQVTDGLNFAPRQIFSITAQMLVISLEVNKGLGVFPGSRKP
ISQQDLKAVTNDVTNAGNRTITFVVVSSPKLGRLIRVDSDNTSQEIFSFTQSMVDEGVIM
YEHLYSKSADWSAEDFFTFTVSSPPSALDIQMFHIVISYEIDRHDQNSRLLANTGAVVQE
GGRVLINKTNLDASNLLIKLPDVQRSMYEVWYQVLSLPQHGMMVVGERNVTKEKPNFSQY
VLDKFGVLYIHDNSESLNDNFTFAVWLNLKSKPATKPRSEVLEEMFNITVFPVNDQSPEL
KTKRLHLKVLQGDVSMLGAENLKVEDLDNAPAELIYTIVSNPNNGYLAMKSNLSVSIKDF
TQADVDSGKVWFVQDGSSSSGVFYFSVTDGKHRPLYKLFSVEVVPIALVLVNLTNIVLPQ
GQTSVTITDVQLSAVTNGRSTNIMYEITQPLKYGHLMIGDEQVTKFEQADLFSGRLFYHL
TNLTASHEVLEFMLYTAEGNLTGQVLNITAKPLVQIVSGLRIPNQATYKFGSSDLDASEL
ANLTNSNPRFEVIVPPSHGRIVKKRFVNDAVFEDTQVFTQADIDSGILLLDIDTNMTGLD
LLNDSFTFVLRADAVQPAIGCFQYSVVPHSPPLVQSLTTEVPFVTSTTTFKAHSASKDEA
LASSQNEEPAIAPQKTEPTIWPEQNHWENLHEEGPLLNQAVETSVSVELKTTNQVNARSP
REQAGESNPWYIIIPLVLVSVLLIVAVTSVCILLMCQKKERTKPLVKSQTDAILSSADQC
LERSLTVPAVTVTPLLKGPERSTASTFVAVKHEQLLPTVVSPTTERYLKNSFLNLNPEMI
QYCRKTNPTLKRNQYWV
NT seq
7074 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcatcctcgcagacattcttacagttgcagtttcgaacaagcaagccacag
ggactacttcttcttgcagctgggaagagtgattattgtttaatggagctacgctcagga
tatgtacaattgagaattaactttggtgggggagaacgagtactgcattctcagcaaaga
tctcagctgaatgatttggcttggcacctggttgaactatgtcatgaacaagataatgtc
acgttggtaattgacaaacgtgatagaactactgcaaaaatgcctggaattctttatgaa
ttaaacattgattatggattctacataggtggtactggtaaacttgatgtcccctacctt
gttggagcactaccccgtttccgaggatgtattgatggtgtatcattcaatcagttagac
attctgatgcctctgagaccttttcctggcttcaaaaacatccatgatgtttcagtgggg
tgcagtgatgaattctttgcaggtgaggaagaacccattagtttcttcagttccaggtcc
tatatttctttcccaacttggaatgtggacaacgagggagtcttcgagtatactttacag
acctcagctgcatgtggtttgctgcttttccaccctgggcaagcaggagatttcattgca
atggaaatggaagatggtttaattaaagcttacattggaaaacataaaagtagaacccat
ctttcttctcgtaggtcagtcagtgatagccactggcactacatcaaactgaaattcaca
gcagaatatttgcagctaacattggatgaagaaactgtgaaaaagtcattacctcccaag
agtaagttgccacttctgaagggatccttctttgtaggcggtgtagatgacagtatacga
tcagaagtgattaagttaatctcagtatctgggaagtatgccagaggaggatccttcaaa
ggctgcttaaggaacctgaaagccaattcagaaaagaaatcactgaagaatgttctagta
actaaggacatttcagctggatgtgaaatgcagagttcttctaaaacaaatctttcttta
gagatgactgtaaagaaccctcctgtgaaagcagctcctgtatttgccatttcccatgaa
aactcaatttctctgggcaaggaagacaaaagccaccttttagttctgagtaacttgatc
gtgctagagggcaaacaggcttcacttgaatctaagcatattaaagttaacttagacttt
cagaaattaggaattaatcagtcacaaattctttttgatataaaggaaccaccctctcat
ggacacttgaaactgaatgttgaaccactgcaggaggtaaatacatttactatgcaggat
gtgtggcaggggaagattctgtacgtccatgatggctctgaggacacttatgattatttt
aatttctccatttctatcagcagtgagaagattgtttctccatatttggaaggaaatgag
cagcatatgtttagcattactgttactccagtaaatgatgcacctgagatcatacttcct
gagggaaacttgcttcttctcttagagaactcaaagaaacgcttgactaatgacctgata
aaagttctcgataaagatacagattctgtgggtctcagactttcagtgcttggaaatctg
aatgcagatgcaggatatttagaaaattcaaggcatcctggaaaagctatcactactttt
tctaatgaggatttaaacaaaggcactgttttctttgtccacacaggcatcaagaactcg
aggattgttctcagggcaagtgatggtgagaagatgagcaacactgttgtgttacgtgtc
atggcagttcctttggattacagagttgtcaacaactcaggaataactctcctccaaggt
gttacagctcttataagacctaggcatctggcagttgaaacaaatgctgtcctccaggat
ctggagatacggtacaagatcacagagccacctcactttggtgaggtccaaaggcagctt
tcaaggggggtttggaagcaagtcagctctttttctcaacgctctctgcagcgtagcaga
gtgcgatactgtagcacttttaaagacattcagctggaaaacgttatggagcaatttaag
ttcaaagttagcataggaaacagaaccagtgaggaatacacatttccgatcaaagtgaaa
tggttacggtacagtctattgaaacatgctcctctagaaattgaaaaatcaaaaaagaag
tacttgaattctggtcatctttttgctgtgattgaagatctagaaatacctgaagatgag
ctgcatttcaaacttctgtccatacccaggaatggacagttactgcttaatgaccagcct
ttgaaaaaagattcagtctttagccaaaaagatattactgatcaaaaagtggcgtatgaa
ttgatccagtaccacaaagactatgattcatttagatttttcatttctacaaagtatctg
gattcaaatttctatgagtttgaagtctacatcaaatcagatttcagaaacattattttg
actaacaatggccttaatgttactgaaggggaaggagaattaataacaagcacgaaactg
tttgtgcaaacaccagataataaaactttccaatatgaagttatacagtttcctaaacat
gggaagttaaaacttactaatttttctggttcatttgagaatagtggcaatcttacaact
ttcactaataaacatataacagataagtgccttatgtatgtgcatgatgattctgagacc
atgtttgacgaatttcttgtcagagctttcagcaaagagtcaggaaagaggacaaacttt
gatccagaagtagaacctttgtcattagaaattagattctgtatttctgtccagctgaag
aatgatgagaaaccggttcgcgtaattgataagatatttgacatagtgaggaacgggcag
cgattattaactctggcagatctttgctatcatgaccctgattctgattttgatgatgga
cagttgctatatattagacgtggtatttccaatggggacttggtgctaacaaatgatact
ttgcatagagtctaccaattcaaacaagtggacctggcgcaaaagcgagtcctatttata
catcatggtgcagattttgggcgttttgtgctttttgtgacagatggcaagcactatact
tccttgcttctggaagttaatgccaccaatccttatgttaggttggcaaataatacagga
ttgttggttcaaaaagggaaagaagaaactatttcaaccactaacctaagtgctactaca
aaccaagacataagaaatgatcatgagcttacatatgaaatactctcttccccaaaatgt
ggaagaatatatgtgaataatgtattaacggattcctttactcagcttgatctgataaaa
gggcatgtgacctacagacatgatgacagcaacaaccttatagacacattgagctttaca
atccatgctggagatgtccatctagatgctggactgcaggttcgtgtatatttggagagt
catcagcagccaccaaggattgtgaacaaaagcaatctcttggttgaagaaggaaaacca
gttaaaatcagtaaaggaaaactgcaagttgttcatgaaaatagttctccatctgagatt
gtgttcacagtaagacaacttccagtacacggatatattcggaggttttcctcagaagaa
agttatctcagttctgaccaaaggccagctttgagcttcacacaacaagatgtcaacgag
ggcaaagttcagtatgtgcagacagtttctgaccaactagaagaccatttttttctggat
gtgaccaatggtgtcagaacagtgagtggaatagagatctctgtagacatcatccccaga
atgattccactggaggtacagaactttacagtatttgaagggggctcaaaagccctggtg
gaagactacctaaaaatttctagtagacactttgcaggactcagctgtgaattcatttta
actgagcagccaaaacatgggtatgttgaaaactctcgtgttcctggaataaagttagct
acatttaccagaaaacaggtggaacaagaattaatttactatgttcatgatgacagtgaa
gaactgatggacagttttactgtgatagtaaataacacggagttgtggaaacaaagttta
ccccaaactgtgtttgtaacggttactgcagtaaatgatgaagctcctgttgtaaaagta
aacagaattcttcaggtctgggtgggttcagtcacagaaataactattgatgacctctgt
gcagaagacaaggactcctcaccatcggaactggtgtattccattactccacctagcaat
gggcacttggctctgaagtcttctccaaacaagagcatccttacttttactcaggctcat
ataattaaaggacagctgatatttgtacacaacggagcaatgtctggaggcttcaacttt
caggtgacagatggtttgaactttgcaccccgacagatttttagcatcacagctcagatg
ctggtcattagccttgaagtgaacaaaggactcggagtctttccaggttccaggaaacct
atttcacaacaagatctgaaagctgtaaccaatgatgtgaccaatgcaggaaacagaact
ataacttttgtggttgtaagttccccaaaacttggaaggctgatcagagtagattctgat
aatacttctcaggaaatcttcagttttacacagtctatggttgatgaaggtgtgatcatg
tatgaacacttatattctaagtcagctgactggagtgcggaagatttctttacatttact
gtctcctctccaccatcagctctggatatacagatgttccatattgtcatttcatatgaa
attgacaggcatgatcagaatagtcgtcttctagcaaatacaggtgccgttgtccaggaa
ggaggtagagtattaatcaacaaaacaaatttagatgcttcaaacctattgattaagcta
cctgatgtacagcgctccatgtatgaagtctggtatcaggttctgtccttacctcaacat
ggcatgatggttgttggagaacgaaatgttaccaaagaaaagcctaacttctcccaatat
gtactggacaaatttggagttttgtacatacatgataattctgaatctctaaatgacaat
ttcacttttgctgtttggttaaacctaaagagcaagcctgctacgaaaccccgtagtgag
gttttagaggagatgtttaatatcactgttttcccagtgaatgatcaatctccagaactg
aagactaaaaggctgcacttgaaagtcctgcagggagatgtgtcaatgctgggggcagag
aatctgaaagttgaagacttagataatgccccagctgagctgatatacaccattgttagc
aaccccaataacggttatttagcaatgaaaagcaatcttagtgtctctataaaagatttc
acacaagctgatgttgacagtggtaaagtctggtttgtacaggatggaagttcatcttct
ggagtgttttatttcagtgtgactgatggtaaacatcgccctttatacaaactgttcagt
gttgaagtcgtaccaattgcacttgtcctagtcaaccttaccaatattgtgctgccacag
ggccagacatctgtcacaattactgatgttcagctttcagctgtcacaaatggaagaagc
actaatatcatgtatgaaataactcagccactcaaatatgggcacctcatgattggagat
gagcaggttactaaatttgagcaggcagatttgttttcgggaaggctcttttaccacctg
acaaatctcactgcttcccatgaagtactggagtttatgctttatactgcagaaggcaat
ctaacaggacaagtgctgaatatcacagcaaagcctttagtacaaattgtatctggcctg
cggattccaaatcaagcaacttacaaatttggaagcagtgacctggatgcttctgagcta
gccaatttgacaaacagtaatcctagatttgaagtgatagtgcccccctctcatggaagg
attgtaaagaaaagatttgtgaatgatgcagtgtttgaagatactcaggtgttcacccag
gctgacattgatagtggtattctgctgctagacatagacacaaatatgacgggccttgat
ctgttgaatgactcatttacatttgtactcagggcagatgctgtgcagcctgctattggt
tgttttcagtattctgttgtgccacacagtcctccacttgtgcaaagtttaacaacagaa
gtgccttttgtaaccagcacaaccactttcaaggctcactctgcctcaaaggatgaggca
ctagcctcctcacagaatgaagagcctgcaatagcaccacagaagactgaaccaactata
tggccagagcagaatcactgggaaaacctacatgaggaaggtccattgctgaatcaggca
gtggagacaagtgtgtctgtggagttgaagactacaaaccaggttaatgctaggagtcct
agagagcaggcaggtgaaagcaacccttggtacatcattatccccctagtcttggtgtct
gtgctactcattgttgctgttacttctgtgtgcattttgttaatgtgtcagaagaaagag
aggacaaaacctttagtcaaaagtcaaacagatgcaatcctcagtagtgcagatcaatgt
ctggaacggagcttgactgtgcccgctgtcacagtgactcccctcctaaaggggcctgag
agaagtacagcctcaacatttgtggcagtaaaacatgaacaactgcttcctacagtggtt
tctccaactacagaaaggtatctgaaaaatagctttctaaatctcaatcctgaaatgatc
caatattgtcgaaaaacaaacccaactttgaagcgcaatcagtactgggtatag
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integrated database retrieval system
