Hirundo rustica (Barn swallow): 120765764
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Entry
120765764 CDS
T09369
Symbol
ZFR
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120765764 (ZFR)
Spliceosome [BR:
hrt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120765764 (ZFR)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
120765764
NCBI-ProteinID:
XP_039946871
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All DBs
Position
Z:19914511..19961220
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AA seq
1068 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYT
VHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQ
EAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPSVAESY
YQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVP
SYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQQKQAAAAAAAAAATAAWT
GTTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKA
SQNTTNNSTSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTE
PNVVTQATSSTSTSASKPTASASNIATSSSTVNSSVASSAVKILTPTANTPLNNASNNKT
SSTAANIAVKKISTPKINFVGGNKLQTTGSKMEEMKSAENVKTPPAATVQTQEVKPDTAA
EPVTPTTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRH
RLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDM
YWRRMEEEQHHWDDRRRVPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPDSSDDRY
VMTKHAAIYPTEEELQAVQKIVSITERALKLVSDSMTDHEKSKNKEGDDKKDGSKDRALK
GVLRVGVLAKGLLLRGDRNVNLVLLCAEKPSKTLLSRIAESLPKQLAVISPEKYDIKCAV
PEAAIILNSCVEPKMQVTITLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDALAAL
RHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQSPGD
ALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLAFRQI
HKVLGMDPLPQMNQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgcccggtagtttcgttcacctatgtgcccagccggctgggggaagat
gccaaaatggccaccggcaactactttggattcacccacagcggggctgctgcccagtac
agccagcagccagcttcgggtgtagcctattcccatccaaccacagttgccagctacact
gtccaccaggccccggtggctgcgcacacggtcactgctgcctatgccccggccgcagcc
acggtggcagtggccaggcctgccccagtggccgtggcagctgctgccacagctgctgcc
tatggtgggtatcccacggcacacacagctacggactacggctacacccagcggcagcaa
gaagctccaccaccaccacctcctgtcaccacgcagaattaccaggattcctactcttat
gttcgatctaccgccccagctgtggcttatgacagcaaacagtattatcagcagccaacc
gcgaccgcagcggccgtggctgctgctgcccagccacagccctcagtggctgagtcctat
taccagacagctccgaaagcaggttatagccaaggggcaactcagtacacccaagcccag
caaacacggcaagtgacagctataaaacctgcaaccccaagtccagcaacaacgacattt
tccatatatccagtgtcctcaactgtgcagccggtggcagctgcagccactgttgttcca
tcctatactcagagtgcaacatacagcacaacagcagtaacctactctggtacctcctat
tctggctatgaagctgcagtgtattcagctgcatcatcctattaccaacagcagcagcag
cagcaacagaaacaggcagcagcagctgctgctgctgctgctgcgacagctgcttggaca
gggaccacctttactaaaaaggcaccattccaaaataagcaactgaaaccaaaacagcct
cccaaaccaccccagatccactactgtgacgtttgcaagatcagctgtgctggaccacag
acttacaaagaacacttagaaggccagaaacacaaaaagaaagaagcagcgttgaaagct
tctcagaacaccaccaacaacagtacttctgctcgtggaactcagaatcagttgcgctgt
gagctttgtgatgtgtcttgtactggagcagatgcttatgctgcccatatccgtggagcc
aagcatcagaaagtggtaaaattgcatacaaaacttggtaaacccattccttcgactgaa
ccaaatgtggttacccaagctacttcctcaacatccacatctgcttccaaaccaactgcc
tctgcttcaaatatagcaactagcagcagtacagtgaactcctctgttgcatcgtctgca
gtgaaaattcttactcccacagcaaacacaccacttaacaatgcatccaacaacaaaaca
tcttcaactgctgctaatatagctgtaaagaaaatatctacaccgaaaataaactttgtt
ggtggcaataagcttcagacaacaggaagtaaaatggaagaaatgaaatcagctgaaaat
gttaaaacacctcctgctgctacagtacaaacacaggaagtaaaacctgacacagcagct
gaaccagtgactcccacaactcttgctgccttgcaaagtgatgtccagccagtgggccat
gactatgtggaggaggtaaggaatgatgaaggaaaggtgatccgctttcactgtaaactc
tgtgaatgcagttttaatgatcctaatgccaaggagatgcatttgaaagggcggcggcac
agactgcagtacaagaaaaaagtaaacccagacttacaagtagaagtaaagcccagtatt
cgagcaagaaaaattcaagaagagaagatgaggaaacagatgcagaaagaagaatactgg
agaaggcgagaagaagaggaacgctggaggatggaaatgaggcgatatgaagaggacatg
tactggaggagaatggaggaagagcaacatcactgggatgaccgtcgcagagtaccagat
ggaggatatcctcatggccctccaggacctctaggtctgctgggagttagacctggcatg
cctcctcaaccccaaggaccagctccgctgcgccgccctgactcctctgatgaccgctat
gtgatgaccaagcatgctgctatatatccaactgaggaggaacttcaggcggtgcaaaaa
attgtttctattactgagcgtgctttgaagctggtttctgacagcatgactgatcatgaa
aaaagcaagaacaaggagggagatgacaaaaaggatggcagcaaagacagagctttgaaa
ggcgttttacgggtgggcgttttggctaaaggtttgctgcttcgtggagaccgaaacgtc
aatcttgttttgttgtgtgctgagaagccctccaagaccttactcagtcgtattgctgaa
agtctccctaagcaacttgcagtaataagtccagagaaatacgatatcaagtgtgcagtt
ccagaagcagcaataattttaaattcgtgtgtggaacccaaaatgcaagttacaatcaca
ctgacatctccagtcattcgggaagagaacatgagggatggagatgtaacctcgggtatg
gtgaaagacccaccggacgtcttggacaggcaaaaatgccttgacgctctggctgctcta
cgccacgctaagtggttccaggctagagctaatggtctgcagtcctgtgtgattatcata
cgtattcttcgtgacctctgtcagcgggttcctacttggtccgattttccaagctgggcc
atggagttgcttgtggaaaaagcaattagcagcgctaccggaccacagagtcctggagat
gcactgagaagagtttttgagtgtatatcttcaggaatcatccttaaaggtggtcctggc
cttcttgacccttgtgaaaaagatccttttgatacacttgctgtaatgacagatcagcaa
cgagaggatattacttcaagtgcacagtttgcgctgagactccttgcattccgtcagata
cacaaagttctaggaatggatccgttaccacagatgaatcagcgcttcaacatccataat
aatcgtaaaaggagaagggacagtgatggggttgatgggtttgaagcagagggaaagaag
gacaaaaaagattatgataacttctaa
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