Hirundo rustica (Barn swallow): 120765927
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Entry
120765927 CDS
T09369
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04068
FoxO signaling pathway
hrt04110
Cell cycle
hrt04120
Ubiquitin mediated proteolysis
hrt04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120765927 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
120765927 (SKP2)
04150 mTOR signaling pathway
120765927 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120765927 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120765927 (SKP2)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120765927 (SKP2)
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Gene cluster
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Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
DUF7885
LRR_6
Motif
Other DBs
NCBI-GeneID:
120765927
NCBI-ProteinID:
XP_039947114
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Position
Z:complement(18706661..18718997)
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AA seq
442 aa
AA seq
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MLQGSPSCAWCQSGSTLRASGFCCVCRKHLQEIPSSSTNVSTSLEWDSGKTSELLSGMGV
SALKKDKLGNENTPQDLLVSSPCLPPKRQKVKDNEKDFVIVRRPWLLREAESGISLDALP
DELLLAIFVYLPLKDLLKVSMICKRWHRLSFDESLWQSLDLTGGNLLPGVLGQLLPAGVT
VFRCPRSCIGDPLFKTSNLLKIQHLDLSNCTVSAADLHSILCLCEKLQNLSLEGLVLSDS
IVKTIARNPDLIRLNLCGCSGFSAEALELMLSSCSMLEELNLSWCEFTATHVKAAVNHVT
SKVTQLNLSGYRENLQIADVKTLVERCPLLVHLDLSDSMMLKPECFQYFKQLVFLQHLCL
SRCYQISPAALVELGEIRTLKTLQVFGIVTDSSLQLLEEALPDMKINGSHFTSIARPTVG
NKKSHEIWGIKCRLTLRNPSFL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaggatccccatcctgtgcttggtgtcagtctggcagtactctcagagcctct
gggttttgctgtgtctgcagaaagcatctccaggagatcccatcctctagcactaatgtt
tccaccagcttggaatgggactctggcaagacctctgagcttctctcggggatgggagtg
tcagcccttaagaaagacaagctgggcaatgagaacacaccacaggacctgctggtgtcg
tcgccctgccttcctccaaaacggcagaaggtgaaggacaacgaaaaggactttgttatc
gtgcgccggccatggctgctccgagaggcagagtcaggtatttctttggatgcacttcca
gatgaattacttttggcaatctttgtctatttgcctctaaaggatttgctgaaagtttct
atgatttgcaagagatggcatcgactttcgtttgatgaatctctctggcagagtcttgat
ttgactggtgggaatctgctgccaggagtgcttggacagttgttgcctgcaggtgttact
gtgttccgctgcccgagatcttgcattggggatccattgtttaaaacaagcaatcttctt
aaaattcagcacctggatttgtcaaactgcacagtgtctgctgcagatctccacagtatt
ctttgtctgtgtgaaaagctgcagaacctcagcttggagggtctagtgctttctgacagc
atcgtcaagaccattgctagaaatcccgatttgatacgactaaatctctgtgggtgctca
gggttttctgcagaggccttggagctgatgttgagcagctgttctatgctggaggagcta
aacttgtcctggtgtgaattcacagccacccatgtcaaagcagcagtcaatcatgttact
tcaaaggtcacccagttaaatttaagtggatacagagagaatctacaaatagcagatgtg
aaaacactggtggagagatgtcctttgcttgtccatttagatctcagtgacagcatgatg
ttaaagcctgagtgcttccagtattttaaacaacttgtgttcctacaacacctgtgcctt
agccgatgttaccagatatcacctgctgccttagtagagcttggtgaaattcgaacactg
aagactcttcaggtatttggaatagtgactgatagctctctgcagctcctcgaggaggca
ctgcccgacatgaagatcaatggttcacatttcaccagcattgcaaggccaactgttggc
aataaaaagagccatgagatttggggcatcaaatgcagattgacactgagaaatcctagt
ttcttgtga
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