Hirundo rustica (Barn swallow): 120765975
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Entry
120765975 CDS
T09369
Symbol
HEXB
Name
(RefSeq) beta-hexosaminidase subunit beta isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt00511
Other glycan degradation
hrt00513
Various types of N-glycan biosynthesis
hrt00520
Amino sugar and nucleotide sugar metabolism
hrt00531
Glycosaminoglycan degradation
hrt00600
Sphingolipid metabolism
hrt00603
Glycosphingolipid biosynthesis - globo and isoglobo series
hrt00604
Glycosphingolipid biosynthesis - ganglio series
hrt01100
Metabolic pathways
hrt04142
Lysosome
Module
hrt_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120765975 (HEXB)
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120765975 (HEXB)
00513 Various types of N-glycan biosynthesis
120765975 (HEXB)
00531 Glycosaminoglycan degradation
120765975 (HEXB)
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
120765975 (HEXB)
00604 Glycosphingolipid biosynthesis - ganglio series
120765975 (HEXB)
00511 Other glycan degradation
120765975 (HEXB)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120765975 (HEXB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hrt03110
]
120765975 (HEXB)
Enzymes [BR:
hrt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
120765975 (HEXB)
Chaperones and folding catalysts [BR:
hrt03110
]
Intramolecular chaperones
Others
120765975 (HEXB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
120765975
NCBI-ProteinID:
XP_039947218
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All DBs
Position
Z:5263107..5278630
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AA seq
560 aa
AA seq
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MSRAMGLAGVLLGLVVVPAVLVSTSLRHGAPGTGAEPEPSGWELAADAVPEDSLWPLPQS
VRTYPRQLQLAPSRFQLVHGAGSSAGPGCGLLQDAFRRYYEYMFGHSRRRTWGRRPLAAR
AEPELFQLQVVIEAGDPGCDRHPHLASNEAYYLTVTGPVAVLKASEVWGALRGLETFSQL
VHEDDYGSFLVNESEINDFPRFPHRGVLLDTSRHYLPLKSILTNLDAMAFNKFNVLHWHI
VDDQSFPYQSIYFPELSDKGAYSSNLIYTPADVRLVIEYARLRGIRVIPEFDTPGHTQSW
GKGQKDLLTPCYNGGQPTGSFGPVNPVWNTTYDFMTMFFKEISSVFPDEFIHLGGDEVDF
SCWKSNPEVKEFMKKQGFGIDYAKLESYYIQNILDIVSSYNKGQMVWQEVFDHKAQLKPD
TVVQVWIASNYARELSSVTGAGLTAVLSAPWYLDYISYGQDWKKYYSVEPLNFVGSEKQK
KLVIGGEACLWGEFVDATNLTPRLWPRASAVAERLWSSSNVTNLEDAYKRLTNHRCRMLR
RGIAAEPVFVGYCAHETRWP
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagccatggggctagccggggtgctgctggggctcgtcgtggtgcccgccgtg
ctggtgagcaccagcctccgccacggcgccccggggaccggggccgagccggagccgtcc
ggctgggagctggcggcggacgccgtccccgaggactcgctgtggcccctgccgcagtct
gtccgcacgtaccctcgccagctgcagctagcgcccagccgcttccagctggtgcatggc
gccggctcctcggcggggccgggctgcgggctgctgcaggacgccttccgcaggtactac
gagtacatgttcgggcattcccggcggcggacgtggggccgcaggccgctggctgcccga
gcggagcccgagctgttccagctgcaggtggtgatcgaggcgggggaccctggctgtgac
aggcacccgcacctcgcctccaatgaggcctactatttaactgtaactgggcctgtggct
gtactgaaagcttctgaggtatggggtgctttaagaggtttggaaaccttcagccagttg
gttcatgaggatgactatggaagctttcttgtcaatgaatccgaaatcaatgacttccca
agatttcctcatagaggagtcttattagatacttcaaggcattatttaccattgaaatct
attcttacaaacctggatgccatggcttttaataagttcaatgttctccactggcatata
gtagatgatcagtccttcccttaccagagcatttatttccctgaattaagtgataagggg
gcatactcctctaatctcatctatactcctgctgacgtccgtctggtgattgagtatgcc
cggttaagaggcatcagagttatcccggagtttgatacgccaggacacacgcagtcttgg
ggaaaaggtcaaaaagatcttctcactccttgttacaatggaggacagccaactgggtcc
tttggacctgtaaatcctgtttggaatacaacttatgacttcatgactatgttctttaaa
gagatcagcagtgtatttccagatgaattcattcatttgggaggagatgaagtggacttc
agttgttggaagtctaaccctgaagtgaaagagttcatgaagaagcaaggttttggcatt
gactatgctaaactggaatcttactatattcagaacattttggacattgtttcctcctac
aacaaaggacaaatggtctggcaagaagtgtttgatcacaaagcacagctgaaaccagac
accgtagttcaagtgtggatagcaagtaactacgctcgtgaactgagcagtgtcactgga
gctgggctgactgctgtcctgtcagcaccctggtacttagactacattagttatgggcaa
gactggaagaaatactacagtgtcgaaccacttaacttcgttggatctgaaaaacagaag
aaacttgtaataggtggagaagcctgcctgtggggggaattcgtagatgcaactaaccta
acaccaagattatggcctcgagcaagtgctgttgcagaaagactctggagcagcagcaat
gtgaccaacttggaggatgcctacaaaaggctgactaatcatcgctgccgcatgctccgc
cgtggcatagcggccgagccggtgtttgttggatactgtgcccatgaaacgagatggccc
taa
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