Halovivax ruber: Halru_0003
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Entry
Halru_0003 CDS
T02402
Name
(GenBank) archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
hru
Halovivax ruber
Pathway
hru03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Halru_0003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hru03032
]
Halru_0003
Enzymes [BR:
hru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Halru_0003
DNA replication proteins [BR:
hru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
Halru_0003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGB14658
UniProt:
L0I794
LinkDB
All DBs
Position
3350..4960
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AA seq
536 aa
AA seq
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MPLEGPARIVQQLTAHGYNAEREAVTLLASRPDPTQALDRVLENTPDETLVIGAKDVERV
LDAETESTREIAPPSESKAGTSDSAPATDTSRKTEIDTAGQDPTASPGERTTDSPGEAAV
DAVETGGFERAGDRSQRDIAIRGDMTGESTGTGEYRDFIAVFRDRLDKLSSKLSGRVNHR
PASSIESMPGGSDVAMIGLVNDIRSTASGHWLVELEDTTGTFPFLVMKDREYVDLVDELL
RDEVIAMEGTLADDSGIAFVDSMYSPDVPRTHEPKTADRHVEAALISDVHVGSDEFMADA
WNDFADWLHTEEAQHVEYLCIAGDMVEGVGVYPNQDEELDIIDIYEQYEAFNEYLKRVPG
DLDIVMIPGNHDAVRLAEPQPGFNEELRSIMSAHDPQIVSNPSTVEIEGVSILMYHGVSL
DEVIAELPSEKASYDEPHKAMYQLLKKRHVAPQFGGHTRLAPEEKDHLVMESVPDIFHTG
HVHKLGFGKYHDVLAINSGCWQAQTDFQKSVNIDPDSGFAPIVDLSTLDVTVRKFS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
gtgccactcgagggtccggcccggatcgtccagcaactgacggcgcacggatacaacgcc
gagcgagaagccgtgacgctgctcgcctcccgtccggatccgactcaggccctcgatcga
gtgctcgaaaacactccagacgaaacgctggttattggcgcgaaagacgtcgaacgagtg
ctcgacgcagagaccgagagtactcgggagatagcgcctccatcagagtcaaaagcggga
acgagcgactccgcaccagccaccgatacctccagaaagacggaaattgacacggctggc
caggaccccaccgcttcacctggagagcggaccacggattcgcccggcgaggcggccgtg
gatgcagttgaaacaggggggttcgagcgtgccggtgatcggtcacagcgcgacatcgcc
attcgtggcgacatgaccggtgagagtaccgggaccggggagtatcgcgacttcatcgcc
gtctttcgggatcgactcgacaaactcagttcgaagctgagcggccgggtcaaccaccga
ccggcgagttcgatcgagagtatgcccggcgggagcgacgtcgcgatgatcggcttggtg
aacgacatccgttcgacggcgagcggtcactggctggtcgaactcgaggacacgaccggg
acgtttcctttcctcgtgatgaaagatcgcgagtacgtcgacctcgtcgacgagttgcta
cgagacgaggtgatcgcgatggaggggacgctcgccgacgattcggggatcgcgttcgtc
gatagcatgtactcgccggacgtcccgcgaacgcacgagccgaagaccgccgatcgacac
gtcgaggccgcgcttatcagcgacgtccacgtcggcagcgatgagttcatggccgacgcg
tggaacgacttcgccgactggctccacaccgaggaggcccagcacgtcgagtatctctgt
atcgccggggacatggtcgaaggtgtcggcgtctaccccaaccaggacgaggaactcgac
atcatcgacatctacgaacagtacgaggcgttcaacgagtatctcaaacgggttcccggc
gacctcgacatcgtgatgatccccggtaatcacgacgccgttcggctggccgaaccacaa
ccgggcttcaacgaggagttacgatcgatcatgtccgcccacgacccacagatcgtgagt
aacccctcgaccgtggagatcgagggcgtctcgattctcatgtaccacggcgtctcgctc
gacgaagtgatcgcggagttgccatcggagaaagcgagctacgacgaaccgcacaaggcg
atgtaccagctgctgaaaaaacgccacgtcgccccgcagttcggcggccacaccagactc
gctcccgaagagaaagatcacctcgtgatggagtccgtccccgacatcttccacacggga
cacgtccacaaactcggcttcgggaagtatcacgacgtgctcgcgatcaactcgggctgc
tggcaggcccagacggacttccagaagagcgtcaacatcgaccccgactcgggcttcgcc
ccgatcgtcgatctcagcacgctcgacgtgaccgttcgaaagttctcctga
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