Halovivax ruber: Halru_0150
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Entry
Halru_0150 CDS
T02402
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hru
Halovivax ruber
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hru03016
]
Halru_0150
Enzymes [BR:
hru01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Halru_0150
Transfer RNA biogenesis [BR:
hru03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Halru_0150
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AGB14802
UniProt:
L0IA54
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All DBs
Position
complement(154948..156081)
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AA seq
377 aa
AA seq
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MALEGELDSDVVRLGGDARQRFHDARGYGYPLSGNEIALSPVEAAHLLYTDNIDGVRVDG
ERVGFRGFTAREPGVDFAVRYLVYADLRARGLYLSPAREPWIDPDAFDGVDDDTDFAVYP
RGKGPNDGELEYALRVLGERTDVPATALEPGVLAVVDEESEITYLEVATPTVTGDSVRVT
DPGLVPLGTDGMDPSETGVGADLLEDRVVIWNPPTALYERTFYGQPLEGREYDGETPTIQ
CSLLEAAHLASVGVLDLDPGAVRERGRAVEGDRFDRRLRVYTALRERGVVPKTGYKFGAD
FRTYATVDTVDDLGHSEHLIRVVPSTHDFEPRDLSLDVRLAHGVRKTMVVALVTDEPAHP
DDPAEGISWRSVERLTP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcactcgagggcgaactggacagcgacgtcgttcgactcggcggcgacgctcgccag
cggtttcacgacgcccgtggctacggctacccgctctcgggcaacgagatcgccctctcc
cccgtcgaagcggcccacctgctctacacggacaacatagacggggtccgcgtcgacggc
gagcgagtcggctttcggggctttacggcccgcgagccgggggtggacttcgccgtccgc
tacctcgtctacgccgacctccgtgcccggggactgtacctctcgccggcacgtgagccc
tggatcgaccccgacgcgttcgacggcgtcgacgacgacaccgacttcgccgtctacccg
cgcggcaaggggccgaacgacggcgaactcgaatacgccctccgcgtcctcggcgagcga
acggacgtcccagcgacggcgctcgaacccggcgtcctcgccgtcgtcgacgaagagagc
gagattacctacctcgaggtggccacgccgacggtgacgggcgacagcgtccgggtgacc
gatccgggactcgtcccactcggtaccgatgggatggacccgtcggaaaccggcgtcggc
gccgacctgctcgaagaccgcgtcgtgatctggaacccaccgacggcactctacgaacga
accttctacggccagccactggagggccgcgagtacgacggtgagacaccgaccatccag
tgctcgctgctcgaagcggcccacctcgcgtcggtcggcgtgctcgacctggatccgggt
gccgttcgcgagcggggcagagctgtcgaaggcgaccggttcgatcgccggcttcgcgtc
tacaccgcgcttcgggaacgcggcgtcgtcccgaagaccggctacaagttcggcgccgac
tttcgaacgtacgcgaccgtcgacacggtcgacgacctcggccactccgagcacctgatc
cgggtcgtgccgagcacccacgacttcgagccgcgtgacctctcgctcgacgtccggctg
gcccacggcgttcgcaagacgatggtggtcgcgctcgtcacggacgagccagcacaccca
gacgatccagccgagggcatcagctggcggtcggtcgaacgcctgacgccctga
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