Halovivax ruber: Halru_0156
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Entry
Halru_0156 CDS
T02402
Name
(GenBank) putative nuclease of the RecB family
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hru
Halovivax ruber
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hru03032
]
Halru_0156
03400 DNA repair and recombination proteins [BR:
hru03400
]
Halru_0156
Enzymes [BR:
hru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Halru_0156
DNA replication proteins [BR:
hru03032
]
Prokaryotic type
DNA Topoisomerases
Halru_0156
DNA repair and recombination proteins [BR:
hru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Halru_0156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_Top1
NucS_N
SAND_ULT1
Motif
Other DBs
NCBI-ProteinID:
AGB14808
UniProt:
L0I7R5
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All DBs
Position
complement(175965..176708)
Genome browser
AA seq
247 aa
AA seq
DB search
MLEDTIRILAGDCTVMFDGTEREEYRGRVTTIVKPDNTVLVHDVDGYQPVAWLTRADSVS
TERTGGFTLVAKKDVQTLRIATHDREGFTNYRASPAGTPVGTCPTCDGTLVRADGVRCVD
CHERYAIPADAVVRDEYCSCGLPRIRAERGLAFDICLDRTCESLDDAVRDAFDREWSCPD
CSGDLRILRRGGLIAGCEHYPECETGFVVPSGVVDGTCGCGLPAFDTGSDRRCLDAACDR
LVEVPTT
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagacacgatccggatcctcgcgggcgactgcaccgtcatgttcgacgggacc
gagcgcgaggagtaccgcggtcgcgtgacgacgatcgtcaagccagacaacaccgtcctc
gtccacgacgtcgacggctaccagcccgtcgcctggctgacccgggccgacagcgtctcc
accgaacggaccggcggcttcaccctcgtcgcgaagaaagacgtccagacgctgcgcatc
gcgacccacgaccgggagggctttacgaactatcgcgcctcgcccgctggcacgccggtg
ggaacgtgtccgacgtgcgacgggacgctcgtccgcgccgacggcgttcgctgcgtcgac
tgccacgaacgctacgccatcccggccgacgccgtcgtgcgagacgagtactgttcgtgt
ggactgccccgaatccgggccgagcgcggactcgcgttcgacatctgtctcgaccggacc
tgtgaatcgctcgacgacgccgttcgcgacgccttcgaccgcgaatggagctgtcccgac
tgcagcggcgacctgcgcatccttcgccggggtgggctgatcgccggctgtgagcactac
cccgagtgtgagaccgggttcgtggtccccagcggcgtcgtcgacggcacctgcggctgc
ggcctgccggcgttcgacaccgggtccgatcgacgctgtctcgacgctgcctgtgatcga
ctcgtcgaagtaccgacgacctga
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