Halovivax ruber: Halru_0206
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Entry
Halru_0206 CDS
T02402
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
hru
Halovivax ruber
Pathway
hru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Halru_0206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hru03400
]
Halru_0206
DNA repair and recombination proteins [BR:
hru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Halru_0206
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Halru_0206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_30
UB2H
DUF8048
DUF87
Motif
Other DBs
NCBI-ProteinID:
AGB14852
UniProt:
L0IA98
LinkDB
All DBs
Position
complement(231210..233276)
Genome browser
AA seq
688 aa
AA seq
DB search
MSETHSGPLQPDRPDADAPFRVDAPFDPAGDQPEAIDQLVEGFESGAEKQTLLGVTGSGK
TNTVSWAVEQLEQPTLIIAHNKTLAAQLYEEFRNLFPNNAVEYFVSYYDYYQPEAYVEQT
DTYIDKDASINDEIDRLRHSATRSLLTRDDVIVIASVSAIYGLGDPQNYENMAMRLEVGD
EMGRDDLLKGLVDLNYERNDVDFTQGTFRVRGDTLEIFPMYGRYAVRVELWGDEIDRMIK
VDPLEGEAKGEQEAVLVHPAEHYSIPETRLERAMDEIRDDLDSRISYFERQGDLVAAQRI
EERTTFDLEMMAETGYCSGIENYSVHLSERESGDAPHTLLDYFPDDFLTVIDESHQTIPQ
IKGQYAGDKSRKDSLVENGFRLPTAYDNRPLTFEEFEEKTDRTLYVSATPSDYEREHSDQ
IVEQIVRPTHLVDPLVEVADATGQVDDLMDRIDDRIDRGERTLVTTLTKRMAEDLTEYLE
EAGVDVAYMHDETDTLERHEIIRSLRLGEIDVLVGINLLREGLDIPEVSLVAILDADQEG
FLRSETTLVQTMGRAARNVNGEVVLYADEPSNAMESAIEETQRRREIQQEYNEEHGFEPT
TIEKEVGETNLPGSKTDTTTVSGRELSDDEEAARYVEELEDRMDEAASNLEFELAADIRD
RILEVREEFGLAGHGDDEEGIAPPAEEF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacgcactcgggacccctccagcccgaccgaccggacgccgacgcgccgttc
cgggtcgacgccccgttcgaccccgcgggcgaccagccggaagccatcgaccagctggtc
gaggggttcgagtcgggcgcggagaaacagaccctgctcggcgtgaccgggtctggcaag
accaacacggtctcctgggcggtcgaacagttagaacagcccaccctgatcatcgcccac
aacaagaccctcgccgcccagctctacgaggagttccggaatctctttccaaacaacgcc
gtcgagtacttcgtctcgtactacgactactaccagcccgaggcctacgtcgagcagacc
gacacctacatcgacaaggacgcctcgatcaacgacgagatcgaccggctgcgccactcc
gcgacgcgctcgctgctgacccgcgacgacgtcatcgtgatcgcctccgtctcggccatc
tacggcctcggtgatccgcagaactacgagaacatggcgatgcggctggaggtcggcgac
gagatgggccgcgacgacctcctgaaggggctggtcgacctgaactacgagcgcaacgac
gtcgatttcacgcagggcacgttccgcgtccggggcgacaccctcgaaatcttcccgatg
tacggccgctacgccgtccgcgtcgaactctggggcgacgagatcgaccgcatgatcaag
gtggatccgcttgagggcgaggcgaagggtgaacaagaggccgtcctcgtccacccggcg
gagcactactccatccccgagacccgcctggagcgggcgatggacgagatccgggacgat
ctggactcgcgcatctcgtacttcgagcgccagggcgacctcgtcgccgcccagcgcatc
gaggaacgcaccacgttcgatctggagatgatggcggagacgggttactgctcgggcatc
gagaactactccgttcacctctcggaacgcgaatccggcgacgcaccccacaccctgctc
gactacttccccgacgacttcctcaccgtcatcgacgagtcccaccagacgatcccgcag
atcaagggccagtacgccggcgacaagtcccgcaaggactccctcgtcgagaacggtttc
cgtctcccgacggcctacgacaaccgcccgctcaccttcgaggagttcgaggaaaagacc
gaccgtaccctgtacgtctccgcgacgccgagcgattacgagcgcgaacactccgatcag
atcgtcgagcagatcgttcgcccgacccacctggtcgacccgctagtcgaggtcgccgac
gccaccggccaggtcgacgacctgatggaccgcatcgacgaccgcatcgacaggggcgag
cggaccctcgtcacgacgctcaccaaacgcatggcggaggacctcaccgagtatctggag
gaagccggcgtcgacgtcgcctacatgcacgacgagacagacaccttagagcgccacgag
atcatccgctccctgcgcctgggcgagatcgacgtcctcgtcggcatcaacctcctccgt
gaagggctggacatcccggaagtctccctcgtggcgatcctggacgccgatcaagagggt
ttcctccgcagcgagacgaccctcgtccagacgatgggccgggccgcccggaacgtcaac
ggcgaggtcgtcctctacgcagacgaaccctcgaacgccatggagtcggcgatcgaggag
acccagcgccgccgtgagatccagcaggagtacaacgaggaacacggcttcgagcccacg
acgatcgagaaggaggtcggcgagaccaacctccccggcagcaagacggacacgacgacg
gtctccggccgcgaactctcggacgacgaggaggccgcccgctacgtcgaagagctggaa
gaccggatggacgaggccgccagcaacctggagttcgaactggccgcagacatccgcgac
cgcatcctcgaggtccgcgaagagttcggcctggcgggccacggcgacgacgaggaaggc
atcgccccaccggccgaggagttctga
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