Halovivax ruber: Halru_0273
Help
Entry
Halru_0273 CDS
T02402
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hru
Halovivax ruber
Pathway
hru03420
Nucleotide excision repair
hru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Halru_0273
03430 Mismatch repair
Halru_0273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hru03400
]
Halru_0273
Enzymes [BR:
hru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Halru_0273
DNA repair and recombination proteins [BR:
hru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Halru_0273
MMR (mismatch excision repair)
Other MMR factors
Halru_0273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
Herpes_ori_bp
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AGB14919
UniProt:
L0I897
LinkDB
All DBs
Position
complement(305298..307175)
Genome browser
AA seq
625 aa
AA seq
DB search
MTASDTTVTRLFGGPGSGKTTALLDHVEEILEADDVTFRDILVVSYTRAAAQEVRERLAE
RLDENPRSLQGNVCTMHAKAYELLDLSRGDVIGESDKEGFCEDYGIEYEDEYSGAGRRTA
RSTTIGNKIIATSQWLQRTSRDVSDWYDVPFQWDDEEVRLPPEIDDNAQEGNKYTPTWPS
DDDRIDVPEAIRGWRNYKGQEGKIGFADMLERVEQRSLVPNVDYLVIDEFQDITTLQYDV
YEEWKPHVEQVLIAGDDDQVVYSWQGADPALLLDEEVDDDVVLPNSYRLPSNVLNAVNRE
IRHIDVRQDKDLNPRKEGGIVEAETNKSMLDVVRMVRRALVEGDGTIMLLFRARYQMFQF
IDEFITEGVPFTALTDQRMWTDRLTQYVRAVEAISEDEDIDGLEARRLADMLQDSAFGTN
ERDALFDDIDELQEEAGVDDLEELTVPASVIDEHVPFMPDEASASDMLRKVTSFQKKSVK
AYFNIGEYRGMDTDRVRVGTIHSAKGREADHVFVGTDLTEKVVEQMVATIEDRSGDGEGG
VTDIPGVEEFTKTTSPVPILTDNERRVFYVGMSRARERLVLLENLVDGAPTLPIDVLLNN
ELTDQSLEELVEEAQRPQELEAEAP
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaagcgacacgacggtgacgcgcctcttcggtgggccgggcagcgggaaaacg
accgcgctgctcgaccacgtcgaagagattctcgaagccgacgacgtcacgttccgtgac
attctcgtcgtctcctacacccgtgctgccgcccaggaggtccgcgagcgcctcgccgag
cgtctggacgagaacccccgctcgctgcagggcaacgtctgtacgatgcacgcgaaggcc
tacgaactgctggacctctcgcgcggcgacgtcatcggcgagtccgacaaggaaggcttc
tgtgaggactacggcatcgagtacgaggacgagtacagcggcgccggccgccggaccgcc
cgctcgacgaccatcgggaacaagatcatcgcgacgagccagtggctccagcggaccagc
cgagacgtctccgactggtacgacgttcccttccagtgggacgacgaggaggtccgcctg
ccgccggagatcgacgacaacgcccaggagggtaacaagtacaccccgacgtggccgagc
gacgacgatcgaatcgacgtccccgaggcgatccgtggctggcgcaactacaagggccag
gagggcaagatcggcttcgcggacatgctagagcgagtcgaacagcgctcgctcgtcccg
aacgtcgactacctcgtcatcgacgagtttcaggacatcaccaccctgcagtacgacgtc
tacgaggagtggaaaccccacgtcgagcaggtgctgatcgccggcgacgacgaccaggtc
gtctactcctggcagggcgccgatcccgcgctcctcctggacgaggaggtcgacgacgac
gtcgtcctcccgaactcctaccgcctgccatcgaacgtgttgaacgccgtcaaccgcgag
atccgccacatcgacgtccgccaggacaaggacctcaacccacgcaaggaaggcggcatc
gtcgaggcggagacgaacaagtccatgctcgacgtcgtccggatggtccggcgcgccctc
gtcgagggcgacggcacgatcatgctgctcttccgggcgcgctaccagatgttccagttc
atcgacgagttcatcaccgagggcgtccccttcactgccctgaccgaccagcggatgtgg
accgaccgcctgacccagtacgtccgcgccgtcgaggccatcagcgaggacgaggatatc
gacgggctggaggcgcgtcgactcgccgacatgctccaggactccgcgttcggcaccaac
gagcgcgacgccctcttcgacgacatcgacgaactgcaggaggaggcgggcgtcgacgat
ctggaggaactcaccgtccccgcctcggtgatcgacgagcacgtcccgttcatgcccgac
gaagcgtccgcgtcggacatgctccggaaggtgaccagcttccagaagaagtccgtcaag
gcctacttcaacatcggcgagtaccgcgggatggacaccgaccgcgtccgcgtcggcacc
atccactccgcgaagggtcgcgaggccgaccacgtcttcgtcggcaccgacctcaccgag
aaggtcgtcgagcagatggtcgccaccatcgaggatcgctccggcgacggcgagggcggc
gtcaccgacatccccggcgtcgaagagttcaccaagaccacctcgcccgtccccatcctc
accgacaacgaacggcgcgtcttctacgtcgggatgtcccgggctcgcgaacggctcgtc
ttgctcgagaatctggtcgacggtgcccccacgctgccgatcgacgtcctgctgaacaac
gagctcacggaccagagcctcgaggaactcgtcgaggaggcccagcgcccacaggaactc
gaagccgaagcgccgtga
DBGET
integrated database retrieval system
