Halovivax ruber: Halru_0325
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Entry
Halru_0325 CDS
T02402
Name
(GenBank) putative ATPase, Rnase L inhibitor (RLI) like protein
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
hru
Halovivax ruber
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hru03009
]
Halru_0325
Ribosome biogenesis [BR:
hru03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
Halru_0325
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
Fer4_RLI
AAA_22
AAA_16
nSTAND3
Rad17
AAA
AAA_14
AAA_24
AAA_23
RNA_helicase
Fer4
NB-ARC
Fer4_6
Fer4_7
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
AGB14969
UniProt:
L0I8E4
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All DBs
Position
356456..358270
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AA seq
604 aa
AA seq
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MADDSIAVVDLDRCSPDRCNYECKNYCPPNRTGKECITLRGEDADEGQPDQVRISEEICL
GETCGICVEKCPFDAIEIINLPQELQDDPVHRYGENAFSMYGLPVPQEGQVTGILGPNGI
GKTTAVRMLAGELEPNLGNYGDPPGWEAVLDAYRGTELQDYIADVRDGDVTVARKPQYVD
QIPSQFDGNTRELLERTDERGELDYLVDRLSIRPVMDQAIDDLSGGELQRVALAAALARD
ADFYFLDEITPYLDIGQRVTAARLVRELAEEDGKSMLVVEHDLAILDLLCDTLHMAYGEP
GAYGVITDPKSVRNGINEYLKGYLENENMRIRPDRIEFEEHAPRTESQGDTLVTYPDLRK
SYGDGEFSLDISGGEIRENEVLGIVGPNGIGKSTFAKLLTGDLEPTEGDAELDLDISYKP
QYVTIDQPMRVDAFLSSITDQFGSSYWNTEIAQPLQLERIMEQNLSDLSGGERQRVAIAA
CLSDTADLYLLDEPSAHLDVEQRVQATRAIRRYAEQQDATVLVIDHDIYMIDLLADRLMV
FDGEPAVAGHAGTPQSMRGGMNDFLSNLEITFRRDERTSRPRINKPDSQLDREQKREGEY
YYAP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgatagcatcgccgtcgtcgatctggatcgctgctcgcccgaccggtgtaac
tacgagtgcaagaactactgcccgccaaatcgtaccggcaaggagtgcatcacgctgcgc
ggcgaggacgccgacgagggccagccggatcaggtgcgcatctccgaagagatctgtctg
ggcgagacctgcgggatctgcgtcgagaagtgcccgttcgacgcgatcgagatcatcaac
ctgccccaggagttgcaggacgacccggttcaccgctacggggagaacgccttctcgatg
tacggtctgccggtcccacaggaggggcaggtcaccggcatcctcgggccgaacggaatc
gggaagacgaccgccgtgcggatgctcgccggcgaactcgaaccgaatctgggaaactac
ggcgacccgccgggctgggaagccgtgctcgacgcctaccgcgggacggaactgcaggac
tacatcgcggacgtccgcgacggcgacgtgaccgtcgcccgcaaaccgcagtacgtcgac
cagattcccagccagttcgacggtaacacgcgcgaactgctcgagcgcaccgacgagcgc
ggcgaactcgactatctcgtcgatcgcctctcgatccgccccgtcatggaccaggccatc
gacgatctctccggtggggagctccagcgcgtcgccctcgcggcggcgctcgctcgcgac
gccgacttctacttcctggacgagatcacgccctacctcgacatcggtcagcgggtgacg
gcggcgcgactcgttcgcgaactcgccgaggaggacggcaagtcgatgctggtcgtcgaa
cacgacctggctatcctcgacctgctgtgtgacaccctccacatggcctacggtgaaccc
ggcgcctacggtgtcatcacggatcccaaatcggttcgcaatggtatcaacgagtatctc
aagggctacctcgagaacgagaacatgcggatccggcccgaccggatcgagttcgaggaa
cacgcgccgcggaccgagagccagggcgacacgctcgtcacctaccccgacctccgcaag
tcctacggcgacggcgagttctccctcgatatctccggcggtgagattcgcgaaaacgag
gtgctcggcatcgtcgggccgaacgggatcgggaagtccaccttcgcgaaactgctgacg
ggcgacctggaaccgaccgaaggcgatgcggagctggatctcgatatctcctacaaaccg
cagtacgtcacgatcgaccagccgatgcgcgtcgacgccttcctctcgtcgatcaccgac
cagttcggctcgtcgtactggaacacggagatcgcccagccgctccagttagaacggatc
atggagcagaacctctcggacctctccggcggggagcgccagcgcgtcgccatcgcggcc
tgtctgtccgacaccgcggatctgtacctcttagacgagccctcggctcacctggacgtc
gaacagcgcgtgcaggcgacccgggcgatccggcgctacgccgaacagcaggacgccacc
gtcctcgtcatcgaccacgacatctacatgatcgacctgctggccgaccgcctgatggtc
ttcgacggcgaacctgccgtcgccggccacgctggcacgccacaatccatgcgcggcggc
atgaacgacttcctctcgaacttggagatcacgttccgccgggacgaacggacctcgcgc
ccgcggatcaacaagcctgactcgcagctggatcgtgagcaaaagcgcgagggcgagtac
tactacgcgccctga
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