Halovivax ruber: Halru_0465
Help
Entry
Halru_0465 CDS
T02402
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hru
Halovivax ruber
Pathway
hru03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Halru_0465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hru03021
]
Halru_0465
Enzymes [BR:
hru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Halru_0465
Transcription machinery [BR:
hru03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Halru_0465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zn_ribbon_TOP3B
DUF5816
Motif
Other DBs
NCBI-ProteinID:
AGB15100
UniProt:
L0I6C7
LinkDB
All DBs
Position
494243..496075
Genome browser
AA seq
610 aa
AA seq
DB search
MASQQQREAKVYVNGSLVGTHPDPNELAEQIREARRVGDVSEMVNVSVKERTREVIVNAD
AGRARRPLIVVDDGEPRITEAEIEALNDGDLEFEDLVAHGSIEFIDAEEEEDIFVAVDED
DLTEDHTHLEIDPQLIFGIGAGMIPYPEHNASPRITMGAGMVKQSLGLPSANYRIRPDTR
QHLLHYPQLSMVKTQTTEQIGFDERPAAQNFVVAVMSYEGFNIEDALVMNKASVERALAR
SHFFRTYEGEERRYPGGQEDRFEIPSQDVRGARGEDAYTHLDEDGLVNPETRVDENSVLL
GKTSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGVVDTVTLMEGEDGSKLSKVSVRDE
RIPELGDKFASRHGQKGVVGHLAPQEDMPFTQEGVVPDLVVNPHALPSRMTVGHILEMIG
GKLGSMEGRRVDGTPFLGEDEDELRGGLEDAGFNSAGKEVMYSGVTGEKIEAEIFVGVIF
YQKLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRIGTMERDVFIGHGAALTLKERL
LDESDREYIHVCGNCGMSAVENVEQRRVYCPNCDEETEIHEIEMSYAFKLLLDEMKALGI
APRLELEDAV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcaacaacaacgagaggcgaaggtgtacgtcaacgggtcgctggtgggcacc
cacccggacccgaacgagctggccgaacagatccgcgaggcgcgtcgcgtcggcgacgtt
tccgagatggtcaacgtctcggtgaaagaacgaacgcgtgaagtcatcgtcaacgccgac
gccggacgggcccgccgtccgctgatcgtcgtcgacgacggcgaaccgcgcatcaccgag
gccgagatcgaggcgctgaacgatggtgatctggagttcgaagatctggtcgcgcacggc
tcgatcgagttcatcgacgccgaggaggaagaggacatcttcgtcgccgtcgacgaggac
gacctcaccgaggaccacacgcacctagagatcgatccacagctgatcttcgggatcggt
gcagggatgatcccctacccggaacacaacgcgagtccgcgcattacgatgggggcgggg
atggtcaagcagtcgctcggcctgccgagcgccaactaccgcatccggcccgatacgcgc
cagcacttgctgcactacccgcagctctcgatggtcaagacccagaccaccgaacagatc
ggtttcgacgagcggcccgccgcgcagaacttcgtcgtcgccgtgatgagctacgagggg
ttcaacatcgaggacgcgctggtcatgaacaaggcgtcggtcgagcgcgcgctcgctcgg
tcacacttcttccgcacctacgagggcgaggagcgacgctaccccggcggccaggaagat
cgcttcgagatcccctctcaggacgtgcgcggcgcccgcggtgaggacgcctacacgcac
ctggacgaggacggcctcgtcaaccccgagacccgcgtcgacgagaactcggtcctgctc
ggcaagacgagtccaccgcgattcttggaggaaccggacgacatgggcggcctctcgcct
cagaagcgccgtgaaacgtcagtgacgatgcgctcgggcgagagcggcgtcgtcgacacg
gtcacgctgatggagggtgaggacggctcgaagctctcgaaagtctccgtgcgcgacgag
cggatccccgaactcggggacaagttcgcgtcccggcacggccagaagggcgtcgtgggc
cacctcgcaccgcaggaggacatgccgttcacgcaagagggtgtcgtgcccgacctcgtc
gtcaacccacacgcgctgccgtcgcggatgacggtcgggcacattctcgagatgatcggt
ggcaagctcggctcgatggaaggccgacgcgtcgacgggacgccgttcctcggcgaggac
gaggacgaactccgcggtgggctggaagacgccgggttcaactccgccggcaaggaggtc
atgtactcgggcgtcaccggcgagaagatcgaggctgagatcttcgtcggcgtgatcttc
taccagaagctctaccacatggtctcgaacaagctgcacgcccgttcacgcgggccggtg
caggtactgacccgtcaaccgacggagggacgagcccgcgaaggtgggcttcgtatcggg
acgatggagcgggacgtcttcatcggccacggtgcggccctgacgctgaaggaacgcctg
ctcgacgagtccgaccgcgagtacatccacgtctgcggcaactgtggcatgagtgccgtc
gagaacgtcgaacaacggcgcgtctactgtccgaactgtgacgaggagaccgagatccac
gagatcgagatgagttacgcgttcaaactcctcttggacgagatgaaagccctcgggatc
gcgccgcgactcgaactggaggatgccgtctaa
DBGET
integrated database retrieval system
