Halovivax ruber: Halru_0530
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Entry
Halru_0530 CDS
T02402
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hru
Halovivax ruber
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hru03016
]
Halru_0530
Enzymes [BR:
hru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Halru_0530
Transfer RNA biogenesis [BR:
hru03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Halru_0530
Prokaryotic type
Halru_0530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
RmlD_sub_bind
Lactamase_B_4
DUF5437
MtrH
Motif
Other DBs
NCBI-ProteinID:
AGB15163
UniProt:
L0I8M4
LinkDB
All DBs
Position
567548..568483
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AA seq
311 aa
AA seq
DB search
MSLRVTFLGTSGAIPTVARNPCSIFVAREGDSLLFDAGEGTQRQLMRYGTGFDISELFVT
HVHGDHVLGIPGLLQTMDFNDRERKLRIHVPRGTRRQVRELAFSLDAHISFPVEIADVDD
GDVVSRGDEYEVRAFRTDHDTRSVGYALVEDERKGRFDRERAEELGVPVGPKFSQLHEGE
PVELDDGTVVRPEQVVGEPRPGRSLVYTGDTRPTARTVEIADEPDLLIHDATFADDRAER
AADTAHSTARQAAEIANRASAKRLALVHLSSRYAGDPAAHLAEARETFSGDADDVSLPDD
GTEIEIPYPDA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttacgcgtgacgttcctcgggaccagcggggcgataccgacggtcgcccgcaat
ccgtgttcgatcttcgtcgcccgggaaggggattcgctgctcttcgacgccggcgaggga
acccagcgccaactcatgcgctatgggaccggcttcgacatttccgagctgttcgtcacg
cacgttcacggcgatcacgtcctcgggatcccgggtctcttgcagacgatggacttcaac
gaccgcgagcggaaactccggattcacgtgccacgagggacgcgccgccaggtacgcgaa
ctggcgttttcactcgatgcgcacatctcgtttcccgtcgagatcgcggacgtcgacgac
ggcgacgtcgtctcccgcggcgacgagtacgaggtccgtgcctttcggacggatcacgac
acccggtcggtcggctacgcactggtcgaagacgagcgcaagggccgattcgaccgcgag
cgcgcggaggaactcggcgtgccggtcggcccgaagttctcgcagctccacgagggcgag
ccggtcgagctcgacgacgggaccgtggtcagaccggaacaggtcgtcggcgagccgcga
ccagggcgcagtctcgtctacaccggtgacacccgcccgacggcgcggacggtcgagatc
gccgacgagccggacctgctgatccacgacgcgaccttcgccgacgaccgcgccgagcgg
gccgccgacaccgcccactcgacggcccggcaggccgccgagatcgccaaccgggccagt
gcgaaacggctggcgctggtccacctctcctcgcgatacgccggcgatcccgccgcccac
ctcgcggaggcccgcgagacgttctcgggcgacgccgacgacgtctccctgcccgacgac
gggaccgagatcgagattccgtacccggacgcctga
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