Halovivax ruber: Halru_1066
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Entry
Halru_1066 CDS
T02402
Name
(GenBank) putative transcriptional regulator
KO
K07730
putative transcriptional regulator
Organism
hru
Halovivax ruber
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hru03000
]
Halru_1066
Transcription factors [BR:
hru03000
]
Prokaryotic type
Helix-turn-helix
Other families
Halru_1066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7839
HTH_24
MarR_2
MarR
HVO_A0261_N
HTH_Crp_2
HTH_5
HTH_IclR
HTH_45
HTH_11
HTH_20
TrmB
DUF7347
DUF7343
HTH_23
Rrf2
HTH_27
Fe_dep_repress
Mnd1
HTH_13
HVO_A0114
WHD_RNase_R
HTH_28
GntR
HTH_PafC
HTH_Cmi2_C
LexA_DNA_bind
HTH_AsnC-type
Mrr_N
DnaD_N
HTH_3
DUF7342
Rio2_N
FaeA
HTH_CodY
NMD3
HTH_10
HTH_34
Dimerisation
Adeno_E4
SMC_ScpB
NirdL-like_HTH
SoFic-like_C
DUF4423
DUF4364
Motif
Other DBs
NCBI-ProteinID:
AGB15684
UniProt:
L0IAC3
LinkDB
All DBs
Position
1098674..1099453
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AA seq
259 aa
AA seq
DB search
MVDVLDNKRVATRLRILVEIAERQPAVSQSEIADEVGVTSQAVSEYIRELVDEGFVEKEA
RSRYRVTNEGVDWLFRTAEGVRRFADHVTEDLLGAMNEAAAIATDDVTEGETVSLTMREG
YIHATPTDDGDATAVATTDAAAGGDVGVAEWEGVIDLEPGTVTVIQIPPVRAGGADAADL
SSREAAIEAADLVVASGVEAVVALESNGVEPAVSVGAGSVASAGAERGLDVIVAATTDVV
GRVTDELRDGDVPYEVKEA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacgtcctcgacaacaaacgggtcgccacccgccttcgtatcctcgtcgagatc
gccgagcgccagccggccgtgagccagagcgagatcgccgacgaggtgggtgtgacgagc
caggccgtcagcgagtacatccgtgaactcgtcgacgagggcttcgtcgagaaggaagcg
cgatcgcgctatcgcgtgacgaacgaaggcgtcgactggctcttccggacggcagaaggc
gtccgccgattcgccgaccacgtcaccgaggatcttcttggggcgatgaacgaagcggcg
gcgatcgcgactgacgacgtcacggaaggcgagaccgtctcactcacgatgcgtgagggc
tacattcacgcaactccgaccgacgatggcgacgcgactgccgtcgcgacgaccgacgcc
gctgccggtggcgatgtcggcgtcgccgagtgggagggcgtcatcgatctcgaacccggc
acggtgacagtcatccagatcccgcctgtccgtgctggcggcgctgacgcggccgatctc
tcgtcgagggaggccgccatcgaagccgcagatctcgtcgtcgccagcggtgtcgaggca
gtggtcgcactggaatcgaacggggtcgaacctgccgtctccgtcggtgccggctcggtc
gcgagtgcgggggcagagcgcggcctcgacgtgatcgtggcggcgacgacggacgtggtc
gggcgcgtcaccgacgaacttcgtgatggcgacgtcccgtacgaagtgaaagaagcgtag
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