Halovivax ruber: Halru_1244
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Entry
Halru_1244 CDS
T02402
Name
(GenBank) phytoene/squalene synthetase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hru
Halovivax ruber
Pathway
hru00100
Steroid biosynthesis
hru00909
Sesquiterpenoid and triterpenoid biosynthesis
hru01100
Metabolic pathways
hru01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Halru_1244
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Halru_1244
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hru01006
]
Halru_1244
Enzymes [BR:
hru01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Halru_1244
Prenyltransferases [BR:
hru01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Halru_1244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Imm2
DUF7108
PEX6_N
Motif
Other DBs
NCBI-ProteinID:
AGB15858
UniProt:
L0IAM1
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All DBs
Position
complement(1290440..1291492)
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AA seq
350 aa
AA seq
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MSSGSPSPALSSDLDWCFDAVHGVSRTFSITIDRLEEPMARQICVGYLLCRIADTIEDAG
HVPPAAQSDLLTEYDRLLDPTDEYTVDQFVDAVSPWLPEPDERSADWTVVAETSRVLRAF
ETLDDEPRELMRDPIRELVGGMAMFTERYADEGGLRLQTIDELEEYCWYAAGTVGTLITE
LLVRDIPSERAAELRDNARSFALLLQLVNIAKDVQSDYHEENNVYLPAEWLAEEAVASDA
VTDTDNHQGVTTVVRRVVDRAEHYLDGAHRYLEIVPEHHGNTLSAWAIPYLLAVGTLREL
RQRSEDVVRTGDVKLPREEVYAVIQRFDSGVSRGELDELRQTMASEPLHR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgagttccggttccccttcaccagcactgtcgtccgatctcgactggtgtttcgacgcg
gtccacggcgtctcgaggaccttctcgatcactatcgaccgcctcgaggagccgatggca
cgccagatctgcgtcggctacctcctctgtcggattgccgatacgatcgaagatgccggc
cacgttcccccggccgcccagtccgacctcctcaccgagtacgatagactgctggatccg
accgacgagtacaccgtcgaccagttcgtggacgcggtcagcccgtggctcccggagccg
gacgagcgatccgccgactggacggtcgtcgcagagacctcgcgagttcttcgagcgttc
gagaccctcgacgacgaaccccgcgagctcatgcgcgacccgatccgggaactcgtcggc
ggcatggcgatgttcaccgagcgctacgccgacgagggtgggcttcgtctccagacgata
gacgaactcgaagaatattgctggtacgccgccggcaccgtcgggacgctcatcacggaa
ctcctcgtccgtgacatcccctccgaacgcgccgcggaactcagggacaacgcgcgatcg
ttcgccctgctgctacagctcgtcaatatcgcgaaagacgtccagtcggactatcacgag
gaaaacaacgtctatctcccggccgaatggctcgccgaggaggcagtcgcgtccgacgcc
gtcaccgacaccgacaaccaccagggtgtgaccacggtcgtccgtcgcgtcgtcgaccgg
gctgagcactatctcgacggcgcgcaccgctacctcgagatcgtccccgagcaccacgga
aacaccctctccgcctgggcgattccgtatctgctcgcggtcgggaccctccgagaactg
cgccagcggtcggaagacgtcgttcgaacgggggacgtcaaactacctcgcgaagaagtc
tacgccgtgatccagcggttcgattctggcgtttctcgaggggaactcgacgaactgcgc
cagacgatggcgtcggaaccccttcatcggtaa
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