Halovivax ruber: Halru_1280
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Entry
Halru_1280 CDS
T02402
Name
(GenBank) transcription initiation factor IIE, alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hru
Halovivax ruber
Pathway
hru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Halru_1280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hru03021
]
Halru_1280
Transcription machinery [BR:
hru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Halru_1280
Prokaryotic type
Archaeal type
TFE
Halru_1280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
Rad50_zn_hook
DUF7129
Prok-RING_1
MUG113
Ogr_Delta
zf-Mss51
Motif
Other DBs
NCBI-ProteinID:
AGB15894
UniProt:
L0IAX5
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All DBs
Position
1329396..1329920
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AA seq
174 aa
AA seq
DB search
MAFEDLLEDPVIQKYLHELVGPKGMPVAAAPPEGEVTDEELAEELDLELNDVRRSLFILY
ENDLASYRRLRDEDSGWLTYLWTFEYDNIPENLEAELHRLYEALSDRREYERTHEFYLCE
ICSIRFEFGEAMDFGFECPECGTPMDAMDNDRLVSSMDERIAALEDELNVGAEA
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggatctcctcgaggacccggtcatacagaagtacctccacgagctggtc
gggccgaaggggatgcccgtcgcggccgccccgcccgagggcgaggtgaccgacgaggaa
ctcgccgaggaactcgatctcgagttgaacgacgtccgccgatcgctgttcatcctgtac
gagaacgatctcgcgagttatcgccggctgcgcgacgaggactccggctggctcacctac
ctctggaccttcgagtacgacaacatcccggagaatctggaagcggagcttcaccgcctc
tacgaggcgctcagcgaccgccgagagtacgaacgaacccacgagttctacctctgtgaa
atctgctcgatccggttcgagttcggtgaggcgatggacttcgggttcgagtgtccggag
tgtgggacaccgatggacgcgatggacaacgatcgcctcgtctcgtcgatggacgagcgt
atcgccgcgctcgaggacgaactcaacgtcggcgcagaggcctga
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