Halovivax ruber: Halru_1327
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Entry
Halru_1327 CDS
T02402
Name
(GenBank) HhH-GPD superfamily base excision DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
hru
Halovivax ruber
Pathway
hru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Halru_1327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hru03400
]
Halru_1327
Enzymes [BR:
hru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Halru_1327
DNA repair and recombination proteins [BR:
hru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Halru_1327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AGB15940
UniProt:
L0I8M2
LinkDB
All DBs
Position
complement(1380303..1380899)
Genome browser
AA seq
198 aa
AA seq
DB search
MFTDEAHGVLRTDPVMAELVETYDPYTETERDEFERLCVSIINQQLSTASANAIRGRVYE
VLDDEITPDRVLSTADQPLLDAGLSGTKVEYLRNAARAFDETDLTRSGLADHSNDEVVDR
LTEIKGIGEWTAEMYLLFVLERPDVLPLGDLAIRNGIQQLYGDGEEMTRAEMRTVADPWR
PYRSVGTRYIWAAYEDDD
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccgacgaggctcacggcgtgctgcgaaccgatccggtgatggcggagctcgtc
gagacctacgacccgtacacggaaacggagcgggacgagttcgagcgcctctgcgtctcg
atcatcaaccagcagctctcgaccgcgagtgcgaacgcgatcagagggcgggtgtacgag
gtcctagacgacgagataacgccggatcgcgtgctctcgaccgcggaccagccgctgttg
gacgccggcctctcggggacgaaagtcgagtacctgcgcaacgccgcccgcgcgttcgac
gagaccgatctcacccgatcgggcctggccgaccactcgaacgacgaggtcgtcgacaga
ctgacggagatcaagggaatcggcgagtggacggcggagatgtacctcctgttcgtcctc
gagcggcccgacgtccttcccctcggagatctggcgatacggaacggcatccagcagttg
tacggcgacggtgaggagatgacgcgcgcggagatgcggaccgtcgcggacccctggcgc
ccgtatcgatccgtcgggacgcgatacatctgggccgcctacgaagacgacgactga
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