Halovivax ruber: Halru_1470
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Entry
Halru_1470 CDS
T02402
Name
(GenBank) bacteriocin biosynthesis docking scaffold, SagD family
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hru
Halovivax ruber
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hru03009
]
Halru_1470
Ribosome biogenesis [BR:
hru03009
]
Prokaryotic type
ribosomal protein modification factors
Halru_1470
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Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
AGB16078
UniProt:
L0IB75
LinkDB
All DBs
Position
complement(1525074..1526807)
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AA seq
577 aa
AA seq
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MDVPVVGGDPVRDEVGAALADVDIDVRSATVDELAQAPVGVVAGVTGSETFEAANRHARS
GETPWIAVEVGGVGGQPIDTVDASVSVFGPKTACFACLRDRVRSTHEGDNSGSKASGSRR
TVRLAGAIAGSECVRTLEQGTNAPFATVTELPYTERPLLPVPGCACQQGDRDRTLDRTDE
SGLTLDETVDAMDRAIDERIGLLKSIGEIDSYPVPYYLATLANTGAYSDVTAPTNAAGVD
HDWNRAFVRAIGEGLERYCAGVYREADFVVSAAESLDAALEPTAIVSPDDTPAFDPSTDS
RWVDGVDLSTGKQTSLPADAVHFPQPGPGYVPQITTGLGLGSSTADALVAGLTEIVERDA
TMLSWYSTADPVELSVSDERFQTVVRRVESEGLAVTPMLVTQDVDVPVVTVAVHREDGDW
PAFAVGSAADLDATAAARSALAEATQNWMELRSIGPDEAADAGAWIGHYGSFPDAARDFL
DTSGTVDAASLSPESVPAGASAVETLVERLTEAGLTPYAARLTTRDVAALGFEAVRVIVP
TAQPLFTANPYFGERAHTVPNKLGAGPRLDGPPHPYP
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggacgtacccgtcgtcggtggcgatccggttcgagacgaagtgggggcagcactggct
gacgtggatatcgacgtgcgatcggcgaccgtcgacgaactggcccaggcgcccgtcggt
gtcgtcgccggagtgaccggttcggagacgtttgaagcggcgaatcggcacgcccggagc
ggcgaaacgccctggatcgccgtcgaagtgggtggcgtcggcggccaaccgatcgatacc
gtcgatgcgtcggtatcggtgttcggtccgaaaacggcctgctttgcgtgcctccgggat
cgtgtccgatcgacacacgagggcgacaatagcgggtcgaaagcgagcggttcccgtcgg
acggtccgcctggccggcgcaatcgccggcagcgagtgcgttcgaaccttagaacaggga
acgaacgcaccgttcgcgaccgtgaccgaactgccctacacagaacgcccgctgcttccc
gtcccggggtgtgcgtgtcagcagggggaccgagaccgcaccctcgatcgaaccgacgaa
tcggggctgacgctcgacgaaaccgtcgacgcgatggatcgggcgatcgacgagcggatc
ggtttgctcaaatcgatcggtgagatcgactcctatccggtgccgtactatcttgctacg
ctcgcgaataccggtgcctatagcgacgtcaccgcacccacgaacgcggccggcgtcgac
cacgattggaatcgggcgttcgtcagggcgatcggggaagggttagagcggtactgcgcc
ggcgtctatcgcgaagcggatttcgtcgtgtcggccgccgaatcactcgatgccgccctt
gaaccgacggcgatcgtcagcccggacgacacccccgcgttcgatccgtcgaccgactcg
cgctgggtcgacggcgtggatctctcgaccggcaagcagacctccctcccggcggatgcg
gtccacttcccccaacccggcccgggctacgtcccacagatcacgaccggcctcggactc
ggatcgtcgaccgccgacgcactcgtggcgggcctgaccgagatcgtcgaacgggatgcg
acgatgctctcgtggtactcgacagccgatcccgtcgaactctcggtgagcgacgagcga
ttccagaccgttgtacgccgggtcgaaagtgagggactggcagttacgccgatgctcgtt
acgcaggacgtcgacgtgccggtcgtcaccgtcgccgtccaccgtgaggacggtgactgg
ccggcgttcgctgtcgggtcggcggcagacctcgacgccacggccgctgcacggagtgcc
ctcgccgaagcgacgcagaactggatggaacttcgctcgatcggcccggacgaggcggcc
gacgcgggcgcctggatcggccactacggatcgttccccgatgctgcccgggactttctc
gacacgtcggggaccgtcgacgcggcgtcgctgtcaccggaatcggttcccgcaggggcg
tcagcggtcgagacactcgtcgagcggctcacggaggcggggctcacgccgtacgccgcc
cgtctcaccacacgcgacgtcgcggcgctcggcttcgaagccgtgcgcgtgatcgttccc
actgcacagccgctgtttacggcaaacccatacttcggagaacgagcgcataccgtgccg
aacaagctgggtgccgggcctcgcctcgacgggccgccacatccgtatccctga
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