Halovivax ruber: Halru_1736
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Entry
Halru_1736 CDS
T02402
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
hru
Halovivax ruber
Pathway
hru00900
Terpenoid backbone biosynthesis
hru01100
Metabolic pathways
hru01110
Biosynthesis of secondary metabolites
Module
hru_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Halru_1736
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
Halru_1736
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hru01006
]
Halru_1736
Enzymes [BR:
hru01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Halru_1736
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Halru_1736
2.5.1.29 geranylgeranyl diphosphate synthase
Halru_1736
Prenyltransferases [BR:
hru01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Halru_1736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF5805
DUF2150
Motif
Other DBs
NCBI-ProteinID:
AGB16337
UniProt:
L0IEG8
LinkDB
All DBs
Position
complement(1780854..1781906)
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AA seq
350 aa
AA seq
DB search
MTSPEAREQTVLEAVRKRRELVNEAIPEELPVRRPERLYEASRYLLDAGGKRLRPSVLLA
TAEALTDVEPLSQSYRSFEPLDDSDPVDMLAAAVSVEVIQSFTLIHDDIMDDDDLRRGVP
AVHREYDVETAILAGDTLYSKAFEIMLDTGAETDRMVRALDVLANTCTQICEGQSLDVQF
EERDEVTTDEYLGMVEQKTAVLYAASAALPAVLLGADEETVDALYGYGLDIGRGFQIHDD
VLDLTVPSETLGKQRGSDLVENKQTLITVHARGQGVDVDSLVDTDDVDAVTEAEIDDAVA
TLEDAGSIEYARSKARELVSNGTDRLNVLPENEAHDLLEDIADYLVERGY
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccctgaggcacgcgaacagacggtgctcgaagcggtccggaagcgtcgcgaa
ctggtcaacgaggcgattcccgaggaactcccggttcgccgaccggaacggctctacgaa
gcgtcgcgctacctgctcgacgcgggtggcaagcggctccgaccgtcggtactgctcgcg
acagcagaagcgctgaccgacgtggagccactctcgcagtcgtatcggtcgttcgagccg
ctcgacgactcggacccggtcgacatgctggcggcagccgtcagcgtcgaagtgatccag
tcgttcacgttgattcacgacgacatcatggacgacgacgatctccgacgcggcgtcccg
gccgtccatcgcgagtacgacgttgagacggcgattctggcgggcgatacgctgtactcg
aaggcgttcgagatcatgctcgatacgggcgccgagacggatcggatggtccgtgcgctc
gacgttctcgcgaacacctgtacacagatctgtgagggacagtcgctcgacgtccagttc
gaagagcgtgacgaagtcacgaccgacgagtatctggggatggtcgaacagaaaaccgcc
gtcctctacgcggcatcggccgcgctgcccgccgtcctcctcggagcggacgaggagact
gtcgacgcgctctacggctacggcctcgacatcgggcgcgggttccagatccacgacgac
gtcctcgatctgacggtcccgagcgagacgctcggcaaacagcgcgggagcgatctcgtc
gagaacaaacagaccctgatcacggttcacgctcgcggacagggcgtcgacgtcgactcg
ctcgtcgacaccgacgacgtcgacgccgtcaccgaggcagagatcgacgacgccgtcgcc
acgctcgaagacgcgggcagtatcgagtacgctcgatcgaaagcccgcgaactcgtctcg
aacgggaccgatcgactgaacgtcctcccggagaacgaggcccacgatctcttagaggac
atcgcggattacctcgtcgaacgcggctactga
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