Halovivax ruber: Halru_1761
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Entry
Halru_1761 CDS
T02402
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
hru
Halovivax ruber
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hru03016
]
Halru_1761
Enzymes [BR:
hru01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Halru_1761
Transfer RNA biogenesis [BR:
hru03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Halru_1761
Prokaryotic type
tRNA splicing ligases
Halru_1761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AGB16360
UniProt:
L0I9V7
LinkDB
All DBs
Position
complement(1798952..1800463)
Genome browser
AA seq
503 aa
AA seq
DB search
MTTYDANGVTLEQVREYVWEIPQDGEMRVPARVLASESLLDEISDDKTLEQLQNTTHLPG
ITDYAICMPDGHQGYGFPVGGVGAMDAENGCISPGAVGYDINCGVRMMTTNLTYDDVRGH
ERELVDSLFANVPSGLGGGGIVEAGIDTIDEILARGVDWALEHGYAVEDDLRHCEDEGVR
EEADPAMVSQKAKDRGKNQIGSLGSGNHFLEVQRVTDVFDDEVGAAFGLTADQIVVLIHC
GSRGLGHQTCNDYLRKIEQHHQGLLDQLPDKELAAAPAGSQLAEEYYAAMNAAINFAWVN
RQLIMHRTREVFERVFDRSWQDMEMELLYDVAHNIAKKETHTVGAASHSADAASGAEPRA
DETERELYVHRKGATRAFPAGHPEVPAAYRDVGQPVIIPGSMGAGSYVLRGGEASMDLTF
GSTAHGAGRLMSRTQAKDEYWGGDVQEELESDHQIYVKAQSGATVAEEAPGVYKDVDEVV
RVSDALGIGDKVARTFPVCNIKG
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgactacgtacgacgcgaacggcgtgaccctggaacaggtccgcgagtacgtctgggag
atcccgcaggacggtgagatgcgggttcccgcgcgtgtgctcgcgagcgagtcgctcctc
gacgagatcagcgacgacaagacgctagaacaactgcaaaatacgacgcacctgccgggg
atcaccgactacgcgatctgcatgcctgacgggcatcagggctacggcttcccggtgggc
ggtgtgggcgcgatggacgccgaaaacggctgtatttcgcccggggcggtcggctacgac
atcaactgtggcgtccgaatgatgacgacgaacctcacctacgacgacgttcggggccac
gaacgcgaactcgtcgattcgctgttcgcgaacgtgccgtccggcctcggcggtggcggg
atcgtcgaggcggggatcgacaccatcgacgagatcctcgcgcgcggcgtcgactgggca
ctggagcacggctacgccgtcgaagacgatctgcgccactgtgaagacgagggcgtccgc
gaggaagccgacccggcgatggtttcgcagaaggcgaaggaccgcgggaagaaccagatc
ggttcgctcgggtcggggaaccacttcctcgaggtccagcgggtcaccgacgtcttcgac
gacgaggtgggtgcggcgttcggactgacggcggatcagatcgtcgtcctcatccactgc
ggctcgcgcggactgggccaccagacgtgcaacgactacctccggaagatcgaacaacac
caccagggactgctcgatcaactcccggacaaggaactcgcggcggcgccggccggctca
cagctcgccgaggagtactacgcggcgatgaacgcggcgatcaacttcgcgtgggtcaac
cggcaactgatcatgcaccgcacccgagaagtcttcgagcgggtgttcgaccgctcgtgg
caggacatggagatggagctgttgtacgacgtcgcacacaacatcgcgaagaaggagacg
cacacagtcggcgcggcgtcgcactccgcagacgccgcgagcggcgccgaaccgcgagcc
gatgagaccgagcgcgaactctacgtccaccggaagggagccacacgagccttcccggcg
ggccatcccgaggtgccagcggcctaccgggacgtcggtcagcccgtcatcatcccgggg
agcatgggcgcgggcagttacgttctccgtggcggcgaggcgtcgatggacctcacgttc
ggctcgacggcgcacggggctggccgtctcatgagtcggacgcaggccaaagacgagtac
tggggcggtgacgtccaggaggaactcgagtccgaccaccagatctacgtcaaggcccag
tccggcgccacggtcgccgaggaagcgccgggcgtttacaaggacgtcgacgaggtcgtc
cgcgtctccgacgcgctcggcatcggcgacaaggtcgctcgaacgttccccgtctgtaac
atcaaggggtga
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