Halovivax ruber: Halru_2020
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Entry
Halru_2020 CDS
T02402
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATP-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
hru
Halovivax ruber
Pathway
hru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Halru_2020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hru02000
]
Halru_2020
Transporters [BR:
hru02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Halru_2020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_29
AIG1
Motif
Other DBs
NCBI-ProteinID:
AGB16614
UniProt:
L0ICW9
LinkDB
All DBs
Position
complement(2062836..2064926)
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AA seq
696 aa
AA seq
DB search
MSEDGSDRSLLRVSGLRKYFFEQNTLVDRLLRTDPVAVRAVDGLSFEIEEGETLGLVGES
GSGKSTTGETILDLQSPTIGDIEYDGQNVSDIESYSEAPRSLSVRAYLLAGVLAVFALAT
LVGGVLAAGSAFAGFDPVGTGASTPLGVLGVLWALAGAALLAGSFGLATQRVWGWRLAVW
TLGALLVLAIATLFVEPIVAVVGVVASVLGVLSLFKIARAYFRPPAFRRETAILFQDPFS
SLDPRQSIGDIIEAPLKTHDWPISDPEIDANADVTTDGIGPDELSVHVDANVDKALEPDG
STVTVPVTVRAGTAGETIDTTASDPGELTIATPSSLDADVITQETGVSVDVSGTGSTGSD
RAIVVETPELVTATVNRDSETITVSIEPESDAVLRKHRVQFLLRRVGLSPDQLDRYPHEF
SGGQRQRIGIARALALEPDFVVLDEPTSALDVSVQAQVLNLLDDLQDELDLTYLLISHDL
SVIRHVCDRVAVMYLGEIVEIGPANDLFTDPQHPYTEALLESVPRASTDERNRTRETISG
DVPSPRNPPSGCRFRTRCPKVIQPDDVELEQSAYRAIMDLRQRIEDRELPIARVRETVDV
PAGDESTAADRAELVDALYERYFANDLPDRDRSTVRSALEHVVDDDWATAADTLRERYES
VCETVNPGLATERHAAACHLRTDVRKEPAETIPSGD
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggacggatccgatcggtccttgcttcgggtctcggggcttcggaaatacttc
ttcgaacagaacacgctcgtcgatcggctattgcggaccgatccggtggccgtccgcgct
gtcgatggcctctccttcgagatcgaggaaggggagacgctcggcctggtcggtgagtcc
ggtagtgggaaatcgacgacgggcgagacgattctcgacctgcagtccccgacgattgga
gacatcgaatacgacggccagaatgtctccgatatcgaatcgtacagcgaggccccgaga
tcgctgtccgttcgcgcgtaccttctcgccggcgtactcgccgtcttcgcgctcgccacg
ctcgtcggcggtgtgctcgccgccggcagtgcgttcgccggattcgatcccgtcggaacg
ggggcatccaccccgctcggtgtcctcggcgtcctgtgggctcttgcaggggcggcactg
ttagcaggttcgttcggcctggccacccagcgtgtctggggttggcgactcgccgtctgg
acgctcggcgcactcctggtcctcgccatcgcgacgcttttcgtcgaaccgatcgtcgcc
gtggttggggtcgtcgcctcggtgctgggtgtgctttccctgttcaagatcgctcgcgcc
tacttcagaccacctgcgttccgacgagagacggcgatcctctttcaggatccgttctcg
agcctcgatccgcgtcagtcgatcggggacatcatcgaggctccgctgaagacccacgac
tggccgatatcggacccagaaatcgacgccaacgccgacgtgacgaccgatgggatcgga
ccggacgaactgtccgtgcacgttgacgcgaacgtggacaaagcgctggagccggatggc
tcgaccgtgaccgtccctgtaaccgtgcgtgctggcacggcaggcgagacgatcgatacg
acggcgagcgatcccggcgaattgactatcgccacgccatcgtcgctcgacgcggacgtc
atcacgcaggaaacgggtgtgtctgtcgatgtatcggggactggatcgaccggttccgac
cgcgctatcgtggtcgaaactccggaactggtaacggcgacggtgaatcgggattcggag
acgatcaccgtctccatcgaacccgaatcggatgcggtactccgcaaacaccgcgtgcag
ttcctgctgcgacgggtcggcctctctccggatcaactcgatcgatatcctcacgagttc
tccggtgggcagcgccagcggatcggcatcgcccgggcgctggcactcgaaccggacttc
gtcgtcctcgacgaaccgacgagtgcgctcgacgtctccgtccaggctcaggttctcaac
ctcctcgacgatctccaggacgaactggacctgacgtacctgttgatcagtcacgacctc
tccgtcatccgccacgtctgcgatcgcgttgcggtgatgtatctcggcgaaatcgtcgag
atcgggccggcaaacgacctgttcaccgacccacagcatccctacactgaggcgttactc
gaaagcgtcccccgagcgagtaccgacgaacgaaaccggacacgggagacgatatcgggg
gacgtgccgtcgccgcgcaatccgccgagcggctgccgattcagaacccgttgtccgaag
gtgattcaaccggacgacgtcgaactcgaacagagcgcgtaccgagcgatcatggacctc
cgccagcgtatcgaggaccgtgaattgccgatagcgcgtgttcgcgaaacggtcgacgtt
cctgccggcgacgaatcgacggcggccgatcgagccgaactcgtcgacgcgttgtacgag
cgctacttcgcgaacgaccttccggaccgcgatcgatcgacggtgcgctccgcgctcgag
cacgtcgtcgacgacgactgggcgactgccgctgataccctccgggaacgatacgagagc
gtctgtgagacagtgaatcccggtctcgcgacggaacgccacgctgcggcctgtcacctg
cggactgacgttcgcaaagaaccagcagagacaattccgtccggggattga
DBGET
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