Halovivax ruber: Halru_2068
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Entry
Halru_2068 CDS
T02402
Name
(GenBank) rRNA pseudouridine synthase, putative
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hru
Halovivax ruber
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hru03016
]
Halru_2068
Enzymes [BR:
hru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Halru_2068
Transfer RNA biogenesis [BR:
hru03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Halru_2068
Prokaryotic type
Halru_2068
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Pus10_C
PUA
Motif
Other DBs
NCBI-ProteinID:
AGB16660
UniProt:
L0IAN5
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All DBs
Position
complement(2107700..2108629)
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AA seq
309 aa
AA seq
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MSLRDPPDDRSIASLLSFGVVNLDKPPGPSSHQVSAWIRDAVDDRLAEAGHDPIGRAAHA
GTLDPKVTGCLPVMLGDATRLAQVFLEGAKEYVAVLECHGPVPTDVESTLAEFEGPIYQK
PPRKSAVSRRLRVREIYDIDALEIEDRRVLLRIRCESGTYVRKLCHDLGLALGTGAHMGD
LRRTATDPFDDRDLVSATDLIDALAFWIEDDEPDPLRSMVDPAERILSDLPAVTIAENAA
AEVANGAPVYAPGVLDVDSGRDGADGDSRTDAPLVACYTPNGSAVCLGNLIGDPDAESGT
VVELERVLV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtcactccgtgacccacccgacgaccggtcgatcgcgtccctgttgagcttcggcgtc
gtcaacctcgacaagccgcctggtccctcgtcgcaccaggtgagcgcctggatcagagac
gccgtcgacgaccgcctcgccgaggccggtcacgacccgatcggacgagcggcccacgcc
gggacgctggatcccaaggtaaccggctgtctccctgtgatgctcggcgacgcgacccgg
ctcgcccaggtgtttctcgaaggggccaaggagtacgtcgccgttctcgagtgtcacggg
ccggttccaaccgacgtcgagtcgacgctcgccgaattcgaggggccgatctaccagaaa
ccgcctcgaaagagcgcggtgtcgcgccgtcttcgcgtccgggagatctacgacatagac
gcgctggagatcgaggaccgtcgggtcctcctgcgaattcgctgtgagagcggaacctac
gtcaggaaactctgtcacgacctgggcctcgcactcggaacgggcgcgcacatgggcgat
ctgcggcggacggcgaccgacccgttcgacgaccgcgatctcgtcagcgcgaccgatctg
atcgacgcgctcgccttctggatcgaggacgacgagccggacccgctccggtcgatggtg
gatcccgcagaacgcatcctgtcggacctgccggcggtgacgatcgcggagaacgcggcg
gcggaggtcgccaacggtgcaccggtctacgcgccgggggtcctcgacgtggactccggg
cgcgatggggcggacggcgattcgcgaactgacgcgccactcgtcgcctgctacacgccg
aacggatcggcggtctgtctgggtaatctgatcggcgacccggatgccgagtctggaacg
gtcgtcgaactcgagcgcgtgctggtgtga
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