KEGG   Halovivax ruber: Halru_2146
Entry
Halru_2146        CDS       T02402                                 
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
  KO
K03124  transcription initiation factor TFIIB
Organism
hru  Halovivax ruber
Pathway
hru03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Halru_2146
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hru03021]
    Halru_2146
Transcription machinery [BR:hru03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     Halru_2146
 Prokaryotic type
  Archaeal type
    TFB
     Halru_2146
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Cyclin_C DUF429 DNA_ligase_ZBD DUF8054_C HTH_24 Sigma70_r4 HTH_Tnp_ISL3 DZR Zn_ribbon_3 Trm112p Zn_ribbon_Nudix A2L_zn_ribbon Zn_ribbon_Top1 TrmB Zn_ribbon_tTFIIB DZR_2 Auto_anti-p27 Zn_ribbon_TFIIB DUF1272
Other DBs
NCBI-ProteinID: AGB16735
UniProt: L0IAX9
LinkDB
Position
2185425..2186396
AA seq 323 aa
MTETRIRTYTDETTREEETERGEEQERCPECGGQLVSDEEHAETVCTDCGLVVEEDEIDR
GPEWRAFDSAERDQKSRVGAPTTNMMHDQGLSTNIGWQNKDAYGKSLSSRQRQKMQRLRT
WNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALEEDLLPGRSIEGV
ATSSLYAAARQAGTPRSLDEISQVSRVDRMELTRTYRYIVRELSLEVKPADPEHYVPRFI
SDLDLSEETERTSRELLESARGDGVHSGKSPVGLAAAAVYAAALLTNEKVTQNEVSEVAN
ISEVTIRNRYKELLEASEMAAPA
NT seq 972 nt   +upstreamnt  +downstreamnt
atgacagaaacacgaatcagaacctacacggacgaaacgacgcgggaggaagagaccgaa
cggggcgaggagcaagaacgctgtcccgaatgcggcgggcaactcgtctccgacgaagaa
cacgccgagaccgtctgtaccgattgcggactggtcgtcgaggaagacgagatcgatcgc
ggcccagagtggcgcgcgttcgacagcgccgagcgagaccagaagtcccgcgtgggcgcc
ccgacgacgaatatgatgcacgaccagggcctgtcgaccaacatcggctggcagaacaag
gacgcctacggcaagtcgctgtcgagccgacagcgccagaagatgcagcgcctgcgcacc
tggaacgagcgcttccgtacccgcgactccaaggagcgcaacctgaagcaggccctcggt
gagatcgaccgaatggccagcgcgctcggcctgccggaaaacgtccgcgagaccgcgtcg
gtcatctaccgccgcgcgctcgaggaggacctcctccccggacgctccatcgagggcgtc
gccacgtcgtcgctgtacgccgccgcccgacaggccggcacgccgcgcagcctcgacgag
atctcgcaggtaagccgcgtcgaccgcatggaactgacacgaacctaccggtacatcgtc
cgcgagctctccctcgaggtaaagcccgccgatccggaacactacgtaccccggttcatc
agcgatctggacctctcggaggagaccgaacggacctcgcgcgagctactcgagtcggcc
cgcggtgacggtgtccactcgggcaagagtccggtcggactcgccgctgcagcggtctac
gccgcggccttgctcacgaacgagaaggtaacccagaacgaggtcagcgaagtggcgaac
atctcagaagtgacgatccgcaaccggtacaaggagctcctcgaagcctctgaaatggcc
gcaccggcctga

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