Halovivax ruber: Halru_2311
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Entry
Halru_2311 CDS
T02402
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hru
Halovivax ruber
Pathway
hru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Halru_2311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hru03021
]
Halru_2311
Transcription machinery [BR:
hru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Halru_2311
Prokaryotic type
Archaeal type
TFB
Halru_2311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_tTFIIB
HTH_Tnp_ISL3
Anti-TRAP
A2L_zn_ribbon
Zn_ribbon_LysW
HVO_0758
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AGB16896
UniProt:
L0IFB8
LinkDB
All DBs
Position
complement(2338920..2339900)
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AA seq
326 aa
AA seq
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MTNASQTTRVRRSEQETTEQEDESTHDRVSCPECSGQLVADDEHGETVCADCGLVVAEDS
VDRGPEWRAFDASEKNEKSRVGAPTTNTMHDKGLSTNIDWRNKDAYGNSLGSRQREKMQR
LRKWNERFRTRDSKERNLKQALGEIDRMASAVGLPTNVRETASVIYRRALEEDLLPGRSI
EGVSTACVYAAARQAGVPRSLDEIADVSRVEKNEIARTYRYVVRELGLEVQPADPESYVP
RFASGLDLSDESEHRARSLLKNAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSE
VADISEVTIRNRYHELLEAEDSIGLA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgcctcccagaccacacgagtacgacgtagcgaacaggaaacgaccgaacaa
gaggacgagtcgacccacgaccgcgtcagctgccccgagtgcagcggacagctcgtcgcc
gacgacgaacacggtgagaccgtctgtgccgactgtggcctcgtcgtcgccgaggactcc
gtcgaccgcggcccggagtggcgcgccttcgacgccagcgagaagaacgagaagtctcgc
gtcggcgccccgaccacgaacacgatgcacgacaagggcctgtcgaccaacatcgactgg
cgcaacaaggacgcctacggcaactcgctggggtcgcgccagcgagagaagatgcagcgc
ctgcgcaagtggaacgagcgcttccgcacccgtgactccaaagagcgcaacctgaaacag
gccctcggcgagatcgaccggatggcgagtgcggtcggcctcccgacgaacgtccgcgag
accgcgtcggtcatctaccgccgcgcgttagaagaggacctgctccccggccgatccatc
gaaggtgtctcgacggcctgcgtctacgccgccgcgcgccaggccggcgtcccccgatcg
ctcgacgagatcgccgacgtatcccgcgtcgagaagaacgagatcgcccgcacctaccgc
tacgtcgttcgcgaactcggcctcgaggtccagccggccgaccccgagagctacgtcccg
cgcttcgcctcgggcctcgacctctccgacgagtccgaacaccgcgcgcgctcgctgctg
aagaacgcgaaggagaagggcgtccactccggcaagtcgccggtcgggctcgcggccgcc
gcggtctacgccgccgccctgctcaccaacgagaagacgacccaggccgccgtgagcgag
gtcgccgacatctcagaagtgacgatccgcaaccgctaccacgaactgctcgaagccgaa
gactccatcggcctggcctga
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