Halovivax ruber: Halru_2377
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Entry
Halru_2377 CDS
T02402
Name
(GenBank) apurinic endonuclease APN1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
hru
Halovivax ruber
Pathway
hru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Halru_2377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hru03400
]
Halru_2377
Enzymes [BR:
hru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Halru_2377
DNA repair and recombination proteins [BR:
hru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Halru_2377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Gp22
Motif
Other DBs
NCBI-ProteinID:
AGB16962
UniProt:
L0IG58
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All DBs
Position
2405203..2406072
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AA seq
289 aa
AA seq
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MKVGAHVSISGSRVSSDEETPPYDDIRNAVPRQLAFGGNCGQIFTTSPQVWAEPEIDDEA
AEGFRAKSDAELDGPWVIHSAYLVNLCTPKDDLREKSLSSLQAELDAAEKLGVPYVNTHL
GAHTGAGVEGGLDNAASAIDELDVPDGVTLLVESDAGSGTKLGGEFSHLAGIIDRTDTDI
GICIDTAHTLVAGNDLTTPEAVDETVERFDDEVGLEYLEYIHLNDSKHDVGTHKDEHALI
GEGYIGEDGISAIVNHPELRDLPFALETPTEDGRGFSWNIAKTKELREN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggcgcacacgtctccatctccggatcgcgcgtctcctccgacgaggagacc
ccaccgtacgacgacatccgcaacgccgtcccgcgccagctggcgttcggcggcaactgc
ggccagatcttcaccacgtcgccacaggtctgggccgaacccgagatcgacgacgaggca
gccgagggctttcgggcgaaatccgacgctgaactcgacggaccgtgggtgattcactcg
gcgtacctcgtcaacctctgtacgcccaaagacgaccttcgcgagaagtcactctcgtcg
ctgcaagccgaactcgacgcggccgaaaaactcggcgttccgtacgtaaacacgcatctc
ggcgcccacacgggcgctggtgtcgagggtgggctggacaacgccgcgagtgcgatcgac
gaactcgacgtgcccgacggcgtcacgctcctcgtcgaatccgacgccggcagcggcacc
aagctcggcggcgagttctcccacctcgcggggatcatcgaccggaccgacaccgacatc
ggcatctgcatcgacacggcccacacgctcgtcgccggcaacgacctcacgacgcccgaa
gccgtcgacgagacggtcgagcgcttcgacgacgaagtcggcctcgagtacctggagtac
atccacctgaacgactcgaaacacgacgtcggcacgcacaaggacgaacacgccctcatc
ggcgagggctacatcggcgaggacgggatcagcgccatcgtcaaccaccccgaactacgc
gatctaccgttcgccctcgagacgccgaccgaagacggccgcggcttctcgtggaacatc
gcgaagacgaaagaactgcgcgagaactga
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