Halovivax ruber: Halru_2786
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Entry
Halru_2786 CDS
T02402
Name
(GenBank) single-stranded DNA-binding protein
KO
K07466
replication factor A1
Organism
hru
Halovivax ruber
Pathway
hru03030
DNA replication
hru03420
Nucleotide excision repair
hru03430
Mismatch repair
hru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Halru_2786
03420 Nucleotide excision repair
Halru_2786
03430 Mismatch repair
Halru_2786
03440 Homologous recombination
Halru_2786
03460 Fanconi anemia pathway
Halru_2786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hru03000
]
Halru_2786
03032 DNA replication proteins [BR:
hru03032
]
Halru_2786
03400 DNA repair and recombination proteins [BR:
hru03400
]
Halru_2786
Transcription factors [BR:
hru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Halru_2786
DNA replication proteins [BR:
hru03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Halru_2786
DNA repair and recombination proteins [BR:
hru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Halru_2786
MMR (mismatch excision repair)
Halru_2786
DSBR (double strand breaks repair)
HR (homologous recombination)
Halru_2786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_Ssb-like
OB_MEIOB_N
Motif
Other DBs
NCBI-ProteinID:
AGB17359
UniProt:
L0IF28
LinkDB
All DBs
Position
2815018..2816478
Genome browser
AA seq
486 aa
AA seq
DB search
MRGCILFGHSMSDIEGIYEDLEADVSLEKFREAVEAKVEQMGGLADEETAAMLVAHEVGE
SEVGGIADIEPGMEEVKFVAKVTNVGEVKTFEREGEDDDGRVVNVDVADETGAVRITFWD
ERAVAAVEELEAGQVLRIKGRPKDGYSGVEVNVDEAQPDDDTEIEVNVSDTHTVEALTIG
LSDVTLVGEVLETGSIRTFDRDDGSEGKVSNLTLGDETGRVRVTLWDEQADLATEIDDSE
VVEVVDGYVKERDGNLELHVGNQGTVEVVDEDVQYVPDSTPIEDVEIDQTVDLKGVVRSA
DPVRTFDRDDGSEGQVRNIRVQDATGDLRVALWGEKADIDIGPGDEVALADVEIQDGWQD
DLEASAGWRSTITVLNAAETDAGSDSEGGSDSSSLSSFADGGGSKSSASDSDDTSETSAD
PAESSGPADGEEIEFTGVVVQAGEPIILDDGETTMRVDSGTDVGLGEEVTARGPVDDGVI
DAEELF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggttgcatcctgttcgggcatagcatgagcgacatcgaggggatctacgaggat
ctcgaggcggacgtctccctcgagaagtttcgcgaggccgtcgaggccaaagtcgagcaa
atgggcgggctcgcggacgaggagacggccgccatgctcgtcgcccacgaggtgggcgag
agcgaggtcggcgggatcgcagacatcgaaccgggaatggaagaggtgaaattcgtcgcg
aaggtgacgaacgtcggggaggtgaagaccttcgaacgcgagggcgaggacgacgacggc
cgcgtcgtcaacgtcgacgtcgccgacgagacaggggccgtccggatcaccttctgggac
gagcgtgccgtagccgccgtcgaggaactcgaagcgggacaggtgctccggatcaagggc
cgaccgaaggacggctacagcggcgtcgaggtcaacgtcgacgaggcccagccggacgac
gacacggagatcgaggtgaacgtctcggatacacacaccgtcgaggccctcacgatcggg
ctctcggacgtcaccctcgtcggcgaggtgctggagacgggttcgatacgcacgttcgac
cgcgacgacggctccgaggggaaggtctcgaacctcaccctcggcgacgagaccggacgc
gtgcgcgtcactctctgggacgagcaggccgatctcgccaccgaaatcgacgacagcgag
gtcgtcgaggtggtcgacggctacgtcaaagaacgcgacggaaacctcgaactccacgtc
ggcaatcagggaacggtcgaggtcgtcgacgaagacgtccagtacgtcccggacagcaca
ccgatcgaggacgtcgagatcgaccagacggtcgacctgaaaggcgtcgtccgctcggcc
gacccggttcgcaccttcgaccgcgacgacggctccgagggacaggttcgaaacatccgc
gtgcaggacgcgacgggtgacctccgggtcgcgctctggggcgaaaaggccgacatcgac
atcggccccggcgacgaggtcgcgctggccgacgtcgagatccaggacggctggcaggac
gacctcgaagcctccgccggctggcgctccaccatcacggtgttgaacgcggccgagacc
gacgcaggtagtgactcggaagggggcagcgattcctcgagcctctcgtcgttcgccgac
ggcggtgggtcgaagtcgtcagcgtcggattcggacgataccagcgagacgagcgccgat
ccggccgaatcgagcggcccggcggacggcgaggagatcgagttcactggcgtcgtcgtg
caagcgggcgagccaatcatcctcgacgacggcgagacgacgatgcgcgtcgactccggg
accgacgtcggtctcggcgaagaagtgaccgcccgtgggccggtcgacgacggcgtcatc
gacgccgaggaactcttctag
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