Halovivax ruber: Halru_3050
Help
Entry
Halru_3050 CDS
T02402
Name
(GenBank) bacteriocin biosynthesis docking scaffold, SagD family
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hru
Halovivax ruber
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hru03009
]
Halru_3050
Ribosome biogenesis [BR:
hru03009
]
Prokaryotic type
ribosomal protein modification factors
Halru_3050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
DUF1833
Motif
Other DBs
NCBI-ProteinID:
AGB17616
UniProt:
L0IH95
LinkDB
All DBs
Position
3081894..3083174
Genome browser
AA seq
426 aa
AA seq
DB search
MSGDGRAVVDPQYQRLIGKKTGLVNSLYGLQQSRGQPEASLSQPITASVGWLAEADGELE
LALGGKGQTLESSYLSAIGETVERYSLCFPEPDDFVTASYDELAAREAVIDFEYLDIYSE
AIRDERLAPLTRETEISWTAGTHLITGEDIYVPVQLVWMQFGPDYHEHPRFLGTSNGAAA
GSSLTNALLGSLYELIERDAFMKMWCRQETPDRVDLSSMPDVRAFVDERIPQEHISVQPV
VYDSPLAVTSVGGALINERDERPKFILGGNTSVSPAEAVRGAIVESIQGLPFIAEIAMNH
DPSELDPGHAEDNFEENVLYYALPENFDEVAFIVDGDHETCPTDRETSGWDKRDELDYCL
EELDRVGYTPIGFDVTTPDVARAGPRVTKVIVPELVPITPPGTLPVNHPAFDGERDELTA
KPHPYA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagacgggcgagcggtcgtcgatccccagtaccagcgactgatcggcaagaaa
accggactcgtcaattccctctacggcttacagcagagccggggacagcccgaggcgtcg
ctgagccaaccgatcacggcgagcgtggggtggctcgctgaggccgatggcgaactcgag
ctggcactcgggggcaaaggccagaccctcgagagttcgtacctgagcgccatcggggag
accgtcgaacggtattcgctctgtttccccgaaccggacgacttcgtcactgcgagctac
gacgaactcgctgcacgcgaggcagtgatcgacttcgagtatctcgacatctacagcgag
gctatcagagacgagcggctcgcgccgctcacgcgcgaaaccgagatcagctggaccgcg
ggaacgcacctcatcactggcgaagacatctacgttccggtccagctggtgtggatgcag
ttcggaccggactatcacgaacacccgcggttcctcggaacctcgaacggggccgcggcg
ggatcgtcgttgacgaacgcgttgctcggctcgctctacgaactcatcgagcgggacgcg
ttcatgaagatgtggtgcagacaagagacgccggatcgtgtcgacctctcgtcgatgccg
gacgtccgggcgttcgtcgacgaacgcatcccgcaggaacacatctcggtccagccggtc
gtctacgactcgccgctcgcggtgacgtcggtcgggggtgcgctgatcaacgagcgggac
gagcggccgaagttcatcctcggcggaaatacgtcggtctctcccgcggaggcggttcgt
ggtgcgatcgtcgagagcatccaggggctgccgttcatcgcagagatcgcgatgaaccac
gatccatcggagctcgatcccgggcacgccgaggacaatttcgaggagaacgtcctctac
tacgccctaccggagaacttcgacgaggtcgcgttcatcgtcgacggcgatcacgaaacc
tgcccgaccgatcgagagacgagcggctgggacaagcgagacgaactcgactactgtctc
gaagaactcgaccgggtcggatacacgccgatcggattcgatgtaacgacgcccgacgtc
gctcgcgccggaccgcgggtaacgaaggtgatcgtgccggaactcgtcccgattacgccg
ccgggaacgctcccggtgaatcatccggccttcgacggcgaacgagacgagctgaccgcc
aagccgcatccctacgcctga
DBGET
integrated database retrieval system
