Halovivax ruber: Halru_3112
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Entry
Halru_3112 CDS
T02402
Name
(GenBank) ERCC4-like helicase
Organism
hru
Halovivax ruber
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
RNA_helicase_helical
DEAD
ResIII
HHH_5
HHH_2
HHH
Cas3-like_C_2
5_3_exonuc
DprA_N
Motif
Other DBs
NCBI-ProteinID:
AGB17678
UniProt:
L0IFQ5
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Position
3143911..3146370
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AA seq
819 aa
AA seq
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MAVTDEEIPSIDHPLLKPDFLERRLYQLQLAGTAADDDTLVCLPTGLGKTTVSLLVTARR
LDEVGGTSLMLAPTKPLVQQHAEFYREALQIPDDEIVVFTGEVSPDDRQALWDEATIVLA
TPQVIENDLVGSRISLSDVTHLTFDECHRATGDYAYNYIAERYHADARDPLVTGMSASPG
GDEEAILDVCDNLGLQEVAVMTREDADVEEFTHDTDVEWERIDLPDEVLEIRDALNEVIT
DRLEKLKELGVASSTQPDQSQKDLNKMRAELQKLINNDQSEGYKGMSAHAEVMKLRQAVT
LVETQSVEALRRYFERQRNQARSSGASKASQRLVSDPRVREAMRKAEKFDDLHPKYAKTR
MLLAETLGLEGGERVIVFTESRDTAEALTEFLSESFDARRFVGQGDREGSDGMTQTEQQD
ALEAFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQRKGRTGRQSEGRVAV
LMAEDTRDEAYFWISRRREKEMESELRQLKSMADDLADELDDAQHSLADFDGDESPSAGA
SGEGEAGDSTGTRNDGSSSRNGGVDEQPGLQDFAAETDEDSTDNPPVSGGESESTPVPSG
DSDTVEIVADQREMDANIARDLSKRDDAEVRLETLSVGDYVCSDRVVVERKSTADFVDSL
VGGDRSVFEQVGAMARHYSRPVVVVEGEGLYEQRDIHPNAIRGALSSLAVDFGASVLRTE
SEADTTELLAVIAGREQETADREVSVHGEKQDKTLGEQQEYVVSAIAEIGPVTARALLAE
FGTVEAVMTAREDDLLEVEGVGPVTAERIREVVGSEYTE
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgacggacgaggagatcccctccatcgatcatcccctcctgaagcccgacttc
ctggagcggcggctgtatcagctccagctcgcgggcaccgcggccgacgacgacacgctc
gtctgtctcccgacgggtctcgggaagacgaccgtgagcctactggtgaccgcccgacgg
ctcgacgaagtcggcggcacgtcgctcatgctcgcgccgacgaaaccgctcgtccagcaa
cacgccgagttctatcgcgaggcgctgcagatccccgacgacgagatcgtcgtcttcacg
ggcgaagtgagcccggacgaccggcaggcgctgtgggacgaggcgacgatcgtcctggcg
acgccgcaggtgatcgagaacgacctcgtcggcagtcggatctcgctttcagacgtgacc
catctcaccttcgacgagtgtcaccgcgcgaccggcgactacgcgtataactacatcgcc
gagcgctaccacgccgacgctcgcgacccgctggtgaccgggatgtcggcctcgccgggc
ggcgacgaagaagcgatcctggacgtctgtgacaacctcgggctgcaggaggtcgcggtg
atgacccgcgaggacgccgacgtcgaggagttcacccacgacaccgacgtcgagtgggag
cggatcgacctccccgacgaggtgctcgagattcgcgacgcgttgaacgaggtgatcacc
gaccgactggagaagctgaaggaactcggcgtcgcctcctccacccagcccgaccagtcc
cagaaggacctgaacaagatgcgcgcggagttgcagaaattgatcaacaacgaccagtcg
gagggctacaagggcatgtccgcccacgcggaggtgatgaagctccgccaggccgtgacg
ctggtggagacccagagcgtcgaggccctgcgacggtacttcgaacgccagcgcaaccag
gctcgctcctccggtgcgtcgaaggcgagccagcggctggtgtccgacccacgcgtgcgc
gaggcgatgcgcaaggccgagaagttcgacgatctgcaccccaagtacgccaaaacgcgc
atgctgctggccgaaaccctcggcctggaaggtggcgaacgagtcatcgtcttcaccgaa
tcgcgggacacggcggaggcgctcaccgagttcctctcggagagcttcgacgcccggcgc
ttcgtcggccagggcgaccgcgagggttccgacggcatgacccagaccgaacagcaggac
gccctggaggccttccgcgccggcgagttcgaggtgctcgtctcgacctccgtcgcggag
gagggactcgacgtgcccgaggtcgacctcgtcctgttctacgaacccgtcccgacggcc
atccgctcgatccagcgcaagggccggaccggtcggcagtcggagggacgcgtcgccgtc
ctgatggccgaggacacccgcgacgaggcgtacttctggatctcacgccggcgcgagaag
gagatggaatccgaactgcgccagttgaagagcatggccgacgacctcgccgacgaactc
gacgacgcccagcactcgctcgctgacttcgatggggacgaatcaccgtctgccggtgct
tcaggcgaaggcgaagccggcgacagcactggcactcggaatgacggcagttccagtcga
aacggaggggtcgacgagcagccgggcctccaggatttcgcggcagaaactgacgaagat
tcgaccgacaacccccctgtttcaggtggagaatccgaatcgaccccggtgccgtcgggc
gattctgacacagtcgaaatcgtcgccgaccagcgtgagatggacgcgaacatcgcacgc
gacctctcgaaacgcgacgacgccgaggttcgactggagacgctatcggtcggcgactac
gtctgttcggatcgcgtcgtggtcgagcgcaagtcgacggcggacttcgtcgactcgctg
gtcggcggcgaccggtcggtcttcgagcaggtcggggcgatggcgcgccactacagccgg
ccggtcgtcgtggtcgagggcgagggactctacgaacagcgagatatccacccgaacgcg
attcggggcgcactctcgagtctggccgtcgacttcggggcgagcgtcctgcgaactgag
agcgaagccgacacgaccgaactcctggccgtcatcgccgggcgagagcaggagaccgcc
gaccgcgaggtctccgtccacggcgagaagcaggacaagaccctcggcgaacaacaggag
tacgtcgtctccgccatcgccgaaatcggccccgtgacggcccgagcgctgctggccgag
ttcggcaccgtcgaggccgtcatgacggcccgcgaggacgacctcctggaggtcgagggc
gtcggtccggtgacggcagaacgcatccgcgaggtcgtcggcagcgagtacaccgagtaa
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