Halovivax ruber: Halru_3113
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Entry
Halru_3113 CDS
T02402
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hru
Halovivax ruber
Pathway
hru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Halru_3113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hru03021
]
Halru_3113
Transcription machinery [BR:
hru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Halru_3113
Prokaryotic type
Archaeal type
TFB
Halru_3113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
DZR_2
TFIIB_C_1
Motif
Other DBs
NCBI-ProteinID:
AGB17679
UniProt:
L0IFY9
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All DBs
Position
3146679..3147548
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AA seq
289 aa
AA seq
DB search
MGVTDSDNCPECAGRLRMDGTELCCEECGLVVAEDAIDHGPEWRSFEDGPDRRRTGAPLT
RSRHDRGLSTEIGYEARGRITGRKRRQLARLRREHDRARIATKADSNRVCGFSQIKGLVD
RLSLPLDAREQACRLFESAQNDGLLPGRSIEGFAAACVYTVARTLEVPRTIDEVVANASA
TDAELKAAYDAMNRELGLPTGPIEPTTYVPRFASELDLSTDVERLARSFIERLVTNNAIG
GRNPCGVAAACLYVAAKRQGCPVTQAEAGSVADVAPVTIRKTVQTLSEL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtaactgatagcgataactgtcccgaatgtgccgggcgacttcggatggacggc
actgaactgtgctgtgaggagtgtggcctcgtcgtcgcagaggacgccatcgaccacggc
ccggagtggcgctcgttcgaggacggaccggatcgacgacggaccggcgcaccactcact
cgatcgcgtcacgaccgcggcctctcgaccgaaatcggctacgaggcgcgtggccgcatc
accggtcgaaagcgccgacaactcgcccgccttcgacgcgaacacgatcgggcgcggatc
gccacgaaggccgacagcaaccgagtctgtggattctcacagatcaagggactcgtcgat
cggctctcactcccgctcgatgcacgagagcaggcctgccgcctcttcgaatcggcccag
aacgacggcctcctcccgggccgatcgatcgaaggcttcgccgccgcctgcgtctacacc
gtcgcccggacgctcgaggttccgcgaacgatcgacgaggtcgtcgccaacgcaagcgcg
accgacgccgagctcaaagcggcctacgacgcgatgaaccgcgagctcggactcccgact
ggacccatcgaacctacgacgtacgtccctcgattcgcctccgaactcgacctctcgacc
gacgtcgaacgactcgcccgttcgtttatcgagcgattggtgaccaacaacgccatcggc
ggccgcaacccctgcggcgtcgccgccgcctgcctgtacgtggcggcgaaacgccagggc
tgccccgtcacacaggccgaagccggctccgtcgccgacgtcgccccggtcacgattcgc
aagaccgtccagacactctcagagctatag
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