Halorubrum salinarum: HPS36_01100
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Entry
HPS36_01100 CDS
T07841
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hsai
Halorubrum salinarum
Pathway
hsai00100
Steroid biosynthesis
hsai00909
Sesquiterpenoid and triterpenoid biosynthesis
hsai01100
Metabolic pathways
hsai01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hsai00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
HPS36_01100
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
HPS36_01100
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hsai01006
]
HPS36_01100
Enzymes [BR:
hsai01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
HPS36_01100
Prenyltransferases [BR:
hsai01006
]
Terpene biosynthesis
Squalene/phytoene synthase
HPS36_01100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
TPR_TTI1_2nd
DUF7691
Motif
Other DBs
NCBI-ProteinID:
QKG91508
UniProt:
A0A7D3YC03
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All DBs
Position
211685..212746
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AA seq
353 aa
AA seq
DB search
MSGREHAPAEADLAWCHEAVQGVSRTFALTVDVLEEPMASQICVGYLLCRVADTVEDAGH
IPPDAQSDVLRTYRRAIDPDDETDIAEFRETVDEWLPAERDEDWSVVADAPTIVATFEEL
DPEAQAAIVPPVLEMVDGMAMFVDRHATEGGLRIDDRDELEQYCYYAAGTVGNLITNLLT
RGDVAEERAKRLRETAEEFGLLLQLVNVSKDVYDDYTEENNVYLPAEWLEAEGVDQERVV
HPENRESSARVVDRTADYARSFLDDAQAYLETMPLSNGNTMEAWTVPYLLAVGTLRELGS
RPEDALTETGVKVSRQEVFAVMSAASGVGRDSLAELRQTIARTPFHRAVGSAD
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagcggacgagaacacgcccccgccgaggccgacctcgcgtggtgtcacgaggcggtc
cagggggtctcgcggaccttcgcgctgacggtcgacgtgttagaggaaccgatggcgtcg
cagatctgcgtcgggtacctcctctgtcgcgtcgccgacacggtcgaggacgccgggcac
atcccgccggacgcccagagcgacgtgctgcggacgtaccggcgagcgatcgacccggac
gacgagaccgacatcgccgagttccgcgagacggtcgacgagtggctgccggccgagcgc
gacgaagactggagcgtcgtcgccgacgcgcccacgatcgtcgcgacgttcgaggagctc
gacccggaggcgcaggcggccatcgtcccgcccgtgctggagatggtcgacgggatggcg
atgttcgtcgaccgccacgccaccgagggcgggctccgcatcgacgaccgcgacgagttg
gagcagtactgctactacgcggccggcaccgtcggcaacctcatcacgaacctgctcacc
cgcggcgacgtggccgaggagcgcgcgaagcggctgcgggagaccgccgaggagttcggg
ctcctcctccagctcgtgaacgtctcgaaggacgtgtacgacgactacaccgaggagaac
aacgtctacctccccgccgagtggctggaggcggagggcgtcgaccaggagcgcgtcgtc
caccccgagaaccgcgagtcgtccgcgcgcgtcgtcgaccgcaccgccgactacgcccgc
tcgttcctcgacgacgcgcaggcgtacttggagacgatgccgctctcgaacggcaacacg
atggaggcgtggaccgtcccgtacctgctcgcggtcggcaccctccgcgagctggggagc
cgccctgaggacgcgctcaccgagaccggcgtgaaggtgtccagacaggaggtgttcgcg
gtgatgtccgccgcgagcggcgtcggccgcgactcgctggcggagctgcgacagaccatc
gcgcggacccccttccaccgcgcggtcgggtcggcggactga
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